RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 SOX10P56693 466 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 KIF5AQ12840 1032 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 MEA1Q16626 185 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 MIER3Q7Z3K6 550 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 FAM160B2Q86V87 743 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 BAP1Q92560 729 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 ARMCX3Q9UH62 379 aaPredicted RBP17.5■□□□□ 0.39
CTSA-214ENST00000606788 MYH10P35580 1976 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 NR3C1P04150 777 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 TRIM49P0CI25 452 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 TRIM49CP0CI26 452 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 RNASE9P60153 205 aaKnown RBP17.5■□□□□ 0.39
CTSA-214ENST00000606788 GOLGA1Q92805 767 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 TEKT3Q9BXF9 490 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 SALL4Q9UJQ4 1053 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 MYO6Q9UM54 1294 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 KRT86O43790 486 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 TLR2O60603 784 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 ICAM1P05362 532 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 PTGER2P43116 358 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 KRT83P78385 493 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 TMCO3Q6UWJ1 677 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 TRIM59Q8IWR1 403 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 CLEC4DQ8WXI8 215 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 ADAMTS1Q9UHI8 967 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 PLAGL2Q9UPG8 496 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 ARHGEF35A5YM69 484 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 CYP3A4P08684 503 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
CTSA-214ENST00000606788 ITGB3BPQ13352 177 aaPredicted RBP17.49■□□□□ 0.39
CTSA-214ENST00000606788 PLA2G4FQ68DD2 849 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 CAGE1Q8TC20 777 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 ZBED3Q96IU2 234 aaPredicted RBP17.49■□□□□ 0.39
CTSA-214ENST00000606788 PNKPQ96T60 521 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 GOLPH3Q9H4A6 298 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 PCDHA13Q9Y5I0 950 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
CTSA-214ENST00000606788 MAGEA1P43355 309 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 NPEPPSP55786 919 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 SRGAP1Q7Z6B7 1085 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 FAM178BQ8IXR5 827 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 SLC5A5Q92911 643 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 CCDC43Q96MW1 224 aaKnown RBP17.49■□□□□ 0.39
CTSA-214ENST00000606788 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 MXRA8Q9BRK3 442 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 TCEAL9Q9UHQ7 104 aa17.49■□□□□ 0.39
CTSA-214ENST00000606788 ASTN1O14525 1302 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 BAATQ14032 418 aaPredicted RBP17.48■□□□□ 0.39
CTSA-214ENST00000606788 PDXDC1Q6P996 788 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 SYCP3Q8IZU3 236 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 ZSWIM2Q8NEG5 633 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 SYTL5Q8TDW5 730 aaPredicted RBP17.48■□□□□ 0.39
CTSA-214ENST00000606788 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 MMS19Q96T76 1030 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 RMDN3Q96TC7 470 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 KIFC3Q9BVG8 833 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
CTSA-214ENST00000606788 RBAK-RBAKDNI3L0D1 243 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 TBC1D12O60347 775 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 LRRN2O75325 713 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 UGCGQ16739 394 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 COBLL1Q53SF7 1204 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 RETREG2Q8NC44 543 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 FAM84AQ96KN4 292 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 GGA3Q9NZ52 723 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 AJAP1Q9UKB5 411 aaPredicted RBP17.48■□□□□ 0.39
CTSA-214ENST00000606788 PACSIN2Q9UNF0 486 aaPredicted RBP17.48■□□□□ 0.39
CTSA-214ENST00000606788 FHOD1Q9Y613 1164 aa17.48■□□□□ 0.39
CTSA-214ENST00000606788 HIP1RO75146 1068 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 TGFB2P61812 414 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 MTMR1Q13613 665 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 TNFAIP1Q13829 316 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 C1orf186Q6ZWK4 172 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 SPAG5Q96R06 1193 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 PARVGQ9HBI0 331 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 POLR3GO15318 223 aaPredicted RBP17.47■□□□□ 0.39
CTSA-214ENST00000606788 XRCC5P13010 732 aaKnown RBP17.47■□□□□ 0.39
CTSA-214ENST00000606788 SFMBT2Q5VUG0 894 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 SECISBP2LQ93073 1101 aaKnown RBP17.47■□□□□ 0.39
CTSA-214ENST00000606788 POLR3CQ9BUI4 534 aaPredicted RBP17.47■□□□□ 0.39
CTSA-214ENST00000606788 USP20Q9Y2K6 914 aa17.47■□□□□ 0.39
CTSA-214ENST00000606788 FRMD3A2A2Y4 597 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 CTAGE15A4D2H0 777 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 EIF3CLB5ME19 914 aaKnown RBP17.46■□□□□ 0.39
CTSA-214ENST00000606788 TGFB1I1O43294 461 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 CTAGE8P0CG41 777 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 TKFCQ3LXA3 575 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 RSRC2Q7L4I2 434 aaKnown RBP17.46■□□□□ 0.39
CTSA-214ENST00000606788 CTAGE6Q86UF2 777 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 CTAGE4Q8IX94 777 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 EIF3CQ99613 913 aaKnown RBP17.46■□□□□ 0.39
CTSA-214ENST00000606788 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 TMCO5BA8MYB1 307 aa17.46■□□□□ 0.39
CTSA-214ENST00000606788 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
CTSA-214ENST00000606788 VAV2P52735 878 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms