RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 RGMBQ6NW40 437 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 FILIP1Q7Z7B0 1213 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 ABRAQ8N0Z2 381 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 MORC4Q8TE76 937 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 FGFBP2Q9BYJ0 223 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.92■■□□□ 1.42
USP6NL-204ENST00000606752 FAM13AO94988 1023 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 FAM110CQ1W6H9 321 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 FILIP1LQ4L180 1135 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 MIS18BP1Q6P0N0 1132 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 PADI6Q6TGC4 694 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 ABHD15Q6UXT9 468 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 CYFIP1Q7L576 1253 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 TMC6Q7Z403 805 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 ATP6V0A1Q93050 837 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 ZNF830Q96NB3 372 aaPredicted RBP23.91■■□□□ 1.42
USP6NL-204ENST00000606752 ANKEF1Q9NU02 776 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 NEDD9Q14511 834 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 KRT31Q15323 416 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 KCNV1Q6PIU1 500 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 VSTM4Q8IW00 320 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 SCFD1Q8WVM8 642 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 OLFML3Q9NRN5 406 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 GABBR1Q9UBS5 961 aa23.91■■□□□ 1.42
USP6NL-204ENST00000606752 EEF1GP26641 437 aaKnown RBP23.9■■□□□ 1.42
USP6NL-204ENST00000606752 ZNF131P52739 623 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 SP4Q02446 784 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 SWSAP1Q6NVH7 229 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 EEPD1Q7L9B9 569 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 TSG101Q99816 390 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 PARVGQ9HBI0 331 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 ZCCHC17Q9NP64 241 aaKnown RBP23.9■■□□□ 1.42
USP6NL-204ENST00000606752 MAGEC2Q9UBF1 373 aaPredicted RBP23.9■■□□□ 1.42
USP6NL-204ENST00000606752 SEL1LQ9UBV2 794 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 IVNS1ABPQ9Y6Y0 642 aa23.9■■□□□ 1.42
USP6NL-204ENST00000606752 ASB14A6NK59 587 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 SFI1A8K8P3 1242 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 ATG7O95352 703 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 FGFR1OPO95684 399 aaKnown RBP23.89■■□□□ 1.42
USP6NL-204ENST00000606752 UBA1P22314 1058 aaKnown RBP23.89■■□□□ 1.42
USP6NL-204ENST00000606752 GSDMDP57764 484 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 FAM114A1Q8IWE2 563 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 MYCT1Q8N699 235 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 CCDC43Q96MW1 224 aaKnown RBP23.89■■□□□ 1.42
USP6NL-204ENST00000606752 MRPL44Q9H9J2 332 aaKnown RBP23.89■■□□□ 1.42
USP6NL-204ENST00000606752 POLD4Q9HCU8 107 aa23.89■■□□□ 1.42
USP6NL-204ENST00000606752 RTN4Q9NQC3 1192 aaKnown RBP23.89■■□□□ 1.42
USP6NL-204ENST00000606752 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.89■■□□□ 1.42
USP6NL-204ENST00000606752 SUPT20HL2P0C7V6 817 aa23.89■■□□□ 1.41
USP6NL-204ENST00000606752 ADORA2AP29274 412 aa23.89■■□□□ 1.41
USP6NL-204ENST00000606752 ZNF792Q3KQV3 632 aa23.89■■□□□ 1.41
USP6NL-204ENST00000606752 EPM2AIP1Q7L775 607 aaPredicted RBP23.89■■□□□ 1.41
USP6NL-204ENST00000606752 OTUD6AQ7L8S5 288 aa23.89■■□□□ 1.41
USP6NL-204ENST00000606752 CREBRFQ8IUR6 639 aa23.89■■□□□ 1.41
USP6NL-204ENST00000606752 GPBP1L1Q9HC44 474 aaPredicted RBP23.89■■□□□ 1.41
USP6NL-204ENST00000606752 TELO2Q9Y4R8 837 aa23.89■■□□□ 1.41
USP6NL-204ENST00000606752 SORBS3O60504 671 aa23.88■■□□□ 1.41
USP6NL-204ENST00000606752 CASP5P51878 434 aa23.88■■□□□ 1.41
USP6NL-204ENST00000606752 ZCWPW2Q504Y3 356 aa23.88■■□□□ 1.41
USP6NL-204ENST00000606752 UTP14CQ5TAP6 766 aaKnown RBP23.88■■□□□ 1.41
USP6NL-204ENST00000606752 TIPINQ9BVW5 301 aa23.88■■□□□ 1.41
USP6NL-204ENST00000606752 ZNF862O60290 1169 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 HIP1RO75146 1068 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 FARP2O94887 1054 aaPredicted RBP23.87■■□□□ 1.41
USP6NL-204ENST00000606752 MSNP26038 577 aaKnown RBP23.87■■□□□ 1.41
USP6NL-204ENST00000606752 COPB1P53618 953 aaKnown RBP23.87■■□□□ 1.41
USP6NL-204ENST00000606752 XKR9Q5GH70 373 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 CCDC60Q8IWA6 550 aaPredicted RBP23.87■■□□□ 1.41
USP6NL-204ENST00000606752 SYNGAP1Q96PV0 1343 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 KCNF1Q9H3M0 494 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 TLL2Q9Y6L7 1015 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 IGF2BP3O00425 579 aaKnown RBP eCLIP23.87■■□□□ 1.41
USP6NL-204ENST00000606752 N4BP3O15049 544 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 SLC10A3P09131 477 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 INHBEP58166 350 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 MAPK7Q13164 816 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 ANO5Q75V66 913 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 GPR142Q7Z601 462 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 NELFCDQ8IXH7 590 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 KCTD10Q9H3F6 313 aa23.87■■□□□ 1.41
USP6NL-204ENST00000606752 DDX41Q9UJV9 622 aaKnown RBP23.87■■□□□ 1.41
USP6NL-204ENST00000606752 LOXHD1Q8IVV2 1947 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 BACH1O14867 736 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 TEX33O43247 280 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 STBD1O95210 358 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 MYBP10242 640 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 MAPK4P31152 587 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 BMT2Q1RMZ1 405 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 METTL7BQ6UX53 244 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 DAW1Q8N136 415 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 ZNF507Q8TCN5 953 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 EEF2KMTQ96G04 330 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 VPS16Q9H269 839 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 TAB2Q9NYJ8 693 aa23.86■■□□□ 1.41
USP6NL-204ENST00000606752 TMEM150BA6NC51 233 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 USO1O60763 962 aaKnown RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 GCNT3O95395 438 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 NPEPPSP55786 919 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 FKBP3Q00688 224 aaKnown RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 LY6KQ17RY6 165 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms