RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 A0A1W2PQ27 194 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 A0A1W2PQ45 241 aaPredicted RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 A0A1W2PQ64 194 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 A0A1W2PQD8 194 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 A0A1W2PQY0 241 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 GOLGA6L4A6NEF3 574 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 H3BRB1 525 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 DNM1LO00429 736 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 STBD1O95210 358 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 OATP04181 439 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 CMA1P23946 247 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 TXLNAP40222 546 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PSEN2P49810 448 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 MNX1P50219 401 aaPredicted RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 NDUFA8P51970 172 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PSMC5P62195 406 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PSMC6P62333 389 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 MFSD10Q14728 455 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PLCB4Q15147 1175 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 TMEM119Q4V9L6 283 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 HYIQ5T013 277 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PLA2G4FQ68DD2 849 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PLPPR4Q7Z2D5 763 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 CKAP2LQ8IYA6 745 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PCSK9Q8NBP7 692 aaKnown RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 ARRDC4Q8NCT1 418 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 PIGOQ8TEQ8 1089 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 CDK5RAP3Q96JB5 506 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 SH2D3AQ9BRG2 576 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 MTG1Q9BT17 334 aaPredicted RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 CCSER1Q9C0I3 900 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 RNPEPQ9H4A4 650 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 SMARCAD1Q9H4L7 1026 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 ZSWIM4Q9H7M6 989 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 ERAP1Q9NZ08 941 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 SEPT9Q9UHD8 586 aaPredicted RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 ZNF215Q9UL58 517 aaPredicted RBP8.6□□□□□ -1.03
MSH6-211ENST00000606499 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 TRPC6Q9Y210 931 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 HPSEQ9Y251 543 aa8.6□□□□□ -1.03
MSH6-211ENST00000606499 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 DDX11L8A8MPP1 907 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 E9PMD0 336 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 HAS3O00219 553 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 POLR2DO15514 142 aaKnown RBP8.59□□□□□ -1.03
MSH6-211ENST00000606499 ZEB2O60315 1214 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 KPNA6O60684 536 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 LIG1P18858 919 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 YWHABP31946 246 aaKnown RBP8.59□□□□□ -1.03
MSH6-211ENST00000606499 MCM4P33991 863 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 SLC26A2P50443 739 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 UBE2HP62256 183 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 KIAA0753Q2KHM9 967 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 ANO5Q75V66 913 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 C4orf19Q8IY42 314 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 ATP8B4Q8TF62 1192 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 TRAPPC12Q8WVT3 735 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 DHX58Q96C10 678 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 CALML4Q96GE6 196 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 ABHD8Q96I13 439 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 TSEN34Q9BSV6 310 aaKnown RBP8.59□□□□□ -1.03
MSH6-211ENST00000606499 TMEM106CQ9BVX2 250 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 FAM13BQ9NYF5 915 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 KCNH3Q9ULD8 1083 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 SIP14410 1827 aa8.59□□□□□ -1.03
MSH6-211ENST00000606499 ALPK3Q96L96 1907 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 GRIN2DO15399 1336 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 ZBTB42B2RXF5 422 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 GOLGA6L22H0YM25 854 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 DKC1O60832 514 aaKnown RBP eCLIP8.58□□□□□ -1.04
MSH6-211ENST00000606499 LYPLA2O95372 231 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 EN2P19622 333 aaPredicted RBP8.58□□□□□ -1.04
MSH6-211ENST00000606499 MUTP22033 750 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 STAT6P42226 847 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 NPEPPSP55786 919 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 IGBP1P78318 339 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 HIC1Q14526 733 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 DHX8Q14562 1220 aaKnown RBP8.58□□□□□ -1.04
MSH6-211ENST00000606499 E2F4Q16254 413 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 NBPF20Q3BBV1 942 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 MTERF2Q49AM1 385 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 XKR3Q5GH77 459 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 RRAGBQ5VZM2 374 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 CCDC73Q6ZRK6 1079 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 FMR1NBQ8N0W7 255 aaPredicted RBP8.58□□□□□ -1.04
MSH6-211ENST00000606499 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
MSH6-211ENST00000606499 FAM167AQ96KS9 214 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 GLT1D1Q96MS3 346 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 NACC1Q96RE7 527 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 KATNAL1Q9BW62 490 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms