RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 PPFIA2O75334 1257 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 UCHL3P15374 230 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 COA7Q96BR5 231 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 FAM129AQ9BZQ8 928 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 MYH7BA7E2Y1 1941 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 USP17L5A8MUK1 530 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 PRKCIP41743 596 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 CDK8P49336 464 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 HYIQ5T013 277 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 ATP8B4Q8TF62 1192 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 GJA10Q969M2 543 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 SPAG5Q96R06 1193 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 ANKRD2Q9GZV1 360 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 DPH5Q9H2P9 285 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 HDAC9Q9UKV0 1011 aa16.64■□□□□ 0.25
LYSMD4-211ENST00000604213 ATP8B3O60423 1300 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 hCG_1984214I3L0E3 225 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 CETN3O15182 167 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 LDHBP07195 334 aaKnown RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 SCP2P22307 547 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 EIF3BP55884 814 aaKnown RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 PPP4CP60510 307 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 DIXDC1Q155Q3 683 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 HERC4Q5GLZ8 1057 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 CLEC4GQ6UXB4 293 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 NT5DC3Q86UY8 548 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 ZNF713Q8N859 430 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 MIEF2Q96C03 454 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 ZNF317Q96PQ6 595 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 UTP11Q9Y3A2 253 aaKnown RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 IRS2Q9Y4H2 1338 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 A0A0A6YYK5 440 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 E9PMD0 336 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 CAND2O75155 1236 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 FLOT1O75955 427 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 TRIM37O94972 964 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 EZRP15311 586 aaKnown RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 PON1P27169 355 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 SLC8A1P32418 973 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 ELF3P78545 371 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 SPDYCQ5MJ68 293 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 SLC10A5Q5PT55 438 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 TLDC1Q6P9B6 456 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 HES6Q96HZ4 224 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
LYSMD4-211ENST00000604213 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 ANXA13P27216 316 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 TNNI2P48788 182 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 E2F5Q15329 346 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 GRIK5Q16478 980 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 CHADLQ6NUI6 762 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 CCDC197Q8NCU1 140 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 CEP95Q96GE4 821 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 TRIM51Q9BSJ1 452 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 EPB41L4BQ9H329 900 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 ZNF287Q9HBT7 754 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 TTC7AQ9ULT0 858 aaPredicted RBP16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 BAG3O95817 575 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 GCFC2P16383 781 aaKnown RBP16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 DAAM2Q86T65 1068 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 SYCE1Q8N0S2 351 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 FMO2Q99518 471 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 AJAP1Q9UKB5 411 aaPredicted RBP16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 NR2E1Q9Y466 385 aa16.62■□□□□ 0.25
LYSMD4-211ENST00000604213 DDX3XO00571 662 aaKnown RBP eCLIP16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 CTNND1O60716 968 aaKnown RBP16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 NR2F2P24468 414 aa16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 NPEPPSP55786 919 aa16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 FRMD5Q7Z6J6 570 aa16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 INTUQ9ULD6 942 aa16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 KIAA1024Q9UPX6 916 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms