RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 USP38Q8NB14 1042 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 WNT8BQ93098 351 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 VWCEQ96DN2 955 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 NRBP2Q9NSY0 501 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 KAT6AQ92794 2004 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
CCDC12-209ENST00000604164 DKC1O60832 514 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC12-209ENST00000604164 PSMD10O75832 226 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 TDP2O95551 362 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 AMHP03971 560 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 CTSHP09668 335 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 GPNMBQ14956 572 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 MARCH8Q5T0T0 291 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 MIER3Q7Z3K6 550 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 SLFN12Q8IYM2 578 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 KIF2CQ99661 725 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 SQORQ9Y6N5 450 aa13.03□□□□□ -0.32
CCDC12-209ENST00000604164 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
CCDC12-209ENST00000604164 GRXCR1A8MXD5 290 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 MAGEB2O15479 319 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 JAK2O60674 1132 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 KLRC1P26715 233 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 TMOD1P28289 359 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
CCDC12-209ENST00000604164 MRPS6P82932 125 aaKnown RBP13.02□□□□□ -0.33
CCDC12-209ENST00000604164 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 KRT40Q6A162 431 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 MTHFD1LQ6UB35 978 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 DIS3L2Q8IYB7 885 aaKnown RBP13.02□□□□□ -0.33
CCDC12-209ENST00000604164 ETNPPLQ8TBG4 499 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 FAM161BQ96MY7 647 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
CCDC12-209ENST00000604164 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.33
CCDC12-209ENST00000604164 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 CHMP2AO43633 222 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 EDIL3O43854 480 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 TLL1O43897 1013 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 PBX2P40425 430 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
CCDC12-209ENST00000604164 MBTPS1Q14703 1052 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 DBF4BQ8NFT6 615 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
CCDC12-209ENST00000604164 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
CCDC12-209ENST00000604164 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 TTYH1Q9H313 450 aaPredicted RBP13.01□□□□□ -0.33
CCDC12-209ENST00000604164 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 GJB4Q9NTQ9 266 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 TRPV2Q9Y5S1 764 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
CCDC12-209ENST00000604164 BTBD18B2RXH4 712 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 SLC37A4O43826 429 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 CHRNA1P02708 482 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 OATP04181 439 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 RABGGTBP53611 331 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 PRKCEQ02156 737 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 MGAT3Q09327 533 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 NR5A1Q13285 461 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 PPP2R5CQ13362 524 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 EXOC8Q8IYI6 725 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 TNFRSF25Q93038 417 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 GUCD1Q96NT3 240 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 GAS2L1Q99501 681 aaPredicted RBP13□□□□□ -0.33
CCDC12-209ENST00000604164 RAD9AQ99638 391 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 FTHL17Q9BXU8 183 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 CELF4Q9BZC1 486 aaKnown RBP13□□□□□ -0.33
CCDC12-209ENST00000604164 FOXP1Q9H334 677 aaPredicted RBP13□□□□□ -0.33
CCDC12-209ENST00000604164 KCNMB3Q9NPA1 279 aa13□□□□□ -0.33
CCDC12-209ENST00000604164 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
CCDC12-209ENST00000604164 KDM3AQ9Y4C1 1321 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 GHRP10912 638 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 FOSL2P15408 326 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 ATP4AP20648 1035 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 PSMC5P62195 406 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 CDC42EP1Q00587 391 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 ORC2Q13416 577 aaPredicted RBP12.99□□□□□ -0.33
CCDC12-209ENST00000604164 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 B3GNT9Q6UX72 402 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 METTL13Q8N6R0 699 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 TRAPPC12Q8WVT3 735 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 MAP7D2Q96T17 732 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 JPH2Q9BR39 696 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms