RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PDXDC2PQ6P474 469 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 SMAP1Q8IYB5 467 aaPredicted RBP20.53■□□□□ 0.88
CCDC12-208ENST00000603885 BLIDQ8IZY5 108 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 ATP8B4Q8TF62 1192 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 LENG9Q96B70 501 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 ZBTB10Q96DT7 871 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 LINC01553A4QN01 128 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 M0QZ92 97 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 POU3F3P20264 500 aaPredicted RBP20.52■□□□□ 0.88
CCDC12-208ENST00000603885 LPIN1Q14693 890 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 FBXO47Q5MNV8 452 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 DAGLBQ8NCG7 672 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 TBCKQ8TEA7 893 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 AIFM3Q96NN9 605 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 SIP14410 1827 aa20.52■□□□□ 0.88
CCDC12-208ENST00000603885 COL1A2P08123 1366 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 SMIM35A0A1B0GVV1 85 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.51■□□□□ 0.87
CCDC12-208ENST00000603885 PFKFB2O60825 505 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 PSAPP07602 524 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 HTRA4P83105 476 aaPredicted RBP20.51■□□□□ 0.87
CCDC12-208ENST00000603885 MTHFD1LQ6UB35 978 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 TSHZ1Q6ZSZ6 1077 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 SPRED2Q7Z698 418 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 CKAP2LQ8IYA6 745 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 TOP1MTQ969P6 601 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 TGS1Q96RS0 853 aaKnown RBP20.51■□□□□ 0.87
CCDC12-208ENST00000603885 SAMM50Q9Y512 469 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 PCDHA10Q9Y5I2 948 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 STK36Q9NRP7 1315 aa20.51■□□□□ 0.87
CCDC12-208ENST00000603885 MSH4O15457 936 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 AK2P54819 239 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 ERVK-21P61565 698 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 ZNF484Q5JVG2 852 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 NME8Q8N427 588 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 YME1L1Q96TA2 773 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 COL25A1Q9BXS0 654 aaPredicted RBP20.5■□□□□ 0.87
CCDC12-208ENST00000603885 PRDM6Q9NQX0 595 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 MAFBQ9Y5Q3 323 aaPredicted RBP20.5■□□□□ 0.87
CCDC12-208ENST00000603885 TRPV2Q9Y5S1 764 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 MTCH2Q9Y6C9 303 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 SQORQ9Y6N5 450 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 VCANP13611 3396 aa20.5■□□□□ 0.87
CCDC12-208ENST00000603885 PRRC2BQ5JSZ5 2229 aaKnown RBP20.5■□□□□ 0.87
CCDC12-208ENST00000603885 WDR64B1ANS9 1081 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 M0R2N6 131 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 EDIL3O43854 480 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 UPP2O95045 317 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 XBP1P17861 261 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 KLRC1P26715 233 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 TMEM62Q0P6H9 643 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 GRB10Q13322 594 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 NPY5RQ15761 445 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 SP7Q8TDD2 431 aaPredicted RBP20.49■□□□□ 0.87
CCDC12-208ENST00000603885 BBXQ8WY36 941 aaPredicted RBP20.49■□□□□ 0.87
CCDC12-208ENST00000603885 IL17RAQ96F46 866 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 RIT2Q99578 217 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 TSPYL2Q9H2G4 693 aaPredicted RBP20.49■□□□□ 0.87
CCDC12-208ENST00000603885 MTUS1Q9ULD2 1270 aa20.49■□□□□ 0.87
CCDC12-208ENST00000603885 MYH9P35579 1960 aaKnown RBP20.48■□□□□ 0.87
CCDC12-208ENST00000603885 COL4A4P53420 1690 aaPredicted RBP20.48■□□□□ 0.87
CCDC12-208ENST00000603885 GAS7O60861 476 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 ATP4AP20648 1035 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 NONOQ15233 471 aaKnown RBP eCLIP20.48■□□□□ 0.878e-10■■■■□ 19.9
CCDC12-208ENST00000603885 Q4G0T1 1027 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 LRCH2Q5VUJ6 765 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 KRT25Q7Z3Z0 450 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 SLC5A5Q92911 643 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 TEKT3Q9BXF9 490 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 CELF4Q9BZC1 486 aaKnown RBP20.48■□□□□ 0.87
CCDC12-208ENST00000603885 DISC1Q9NRI5 854 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 GABBR1Q9UBS5 961 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 KCNJ14Q9UNX9 436 aa20.48■□□□□ 0.87
CCDC12-208ENST00000603885 REV3LO60673 3130 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 LPXNO60711 386 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 TDP2O95551 362 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 CD52P31358 61 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 MOXD1Q6UVY6 613 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 GDPD5Q8WTR4 605 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 ATXN2LQ8WWM7 1075 aaKnown RBP20.47■□□□□ 0.87
CCDC12-208ENST00000603885 FAM167AQ96KS9 214 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 PHF20Q9BVI0 1012 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 AGO3Q9H9G7 860 aaKnown RBP20.47■□□□□ 0.87
CCDC12-208ENST00000603885 CEP131Q9UPN4 1083 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 IGSF9BQ9UPX0 1349 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 KDM3AQ9Y4C1 1321 aa20.47■□□□□ 0.87
CCDC12-208ENST00000603885 COL4A6Q14031 1691 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 CYP3A7-CYP3A51PA0A087WV96 503 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 ZBTB42B2RXF5 422 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 CYP3A7P24462 503 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 SFNP31947 248 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 JAK3P52333 1124 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 SKIV2LQ15477 1246 aaKnown RBP20.46■□□□□ 0.87
CCDC12-208ENST00000603885 TJAP1Q5JTD0 557 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 KRT40Q6A162 431 aa20.46■□□□□ 0.87
CCDC12-208ENST00000603885 TRMT1LQ7Z2T5 733 aaKnown RBP20.46■□□□□ 0.87
CCDC12-208ENST00000603885 WASF1Q92558 559 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms