RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 SLC28A3Q9HAS3 691 aa11.34□□□□□ -0.59
SPCS1-205ENST00000602728 JADE2Q9NQC1 790 aa11.34□□□□□ -0.59
SPCS1-205ENST00000602728 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
SPCS1-205ENST00000602728 TSR3Q9UJK0 312 aaKnown RBP11.34□□□□□ -0.59
SPCS1-205ENST00000602728 ZNF215Q9UL58 517 aaPredicted RBP11.34□□□□□ -0.59
SPCS1-205ENST00000602728 PCDHA11Q9Y5I1 949 aa11.34□□□□□ -0.59
SPCS1-205ENST00000602728 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
SPCS1-205ENST00000602728 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.59
SPCS1-205ENST00000602728 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 SREBF1P36956 1147 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 KCNJ6P48051 423 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 NTRK3Q16288 839 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 KRT40Q6A162 431 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 MICALL1Q8N3F8 863 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 TRAPPC12Q8WVT3 735 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 GAS2L1Q99501 681 aaPredicted RBP11.33□□□□□ -0.6
SPCS1-205ENST00000602728 MXRA8Q9BRK3 442 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 SLC26A6Q9BXS9 759 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 AGXT2Q9BYV1 514 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 EHMT1Q9H9B1 1298 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 JPH1Q9HDC5 661 aaPredicted RBP11.33□□□□□ -0.6
SPCS1-205ENST00000602728 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 VCANP13611 3396 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 EMSYQ7Z589 1322 aa11.33□□□□□ -0.6
SPCS1-205ENST00000602728 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
SPCS1-205ENST00000602728 RSPH10B2B2RC85 870 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 FAM86B1E9PN63 330 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 hCG_1984214I3L0E3 225 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 DLL1O00548 723 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 FAM86B2P0C5J1 330 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 RSPH10BP0C881 870 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 IGFBP4P22692 258 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 IGBP1P78318 339 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 ADAM17P78536 824 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 PPFIA1Q13136 1202 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 STK3Q13188 491 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 AP3B2Q13367 1082 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 CCDC85BQ15834 202 aaPredicted RBP11.32□□□□□ -0.6
SPCS1-205ENST00000602728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPCS1-205ENST00000602728 ZNF713Q8N859 430 aaPredicted RBP11.32□□□□□ -0.6
SPCS1-205ENST00000602728 USP26Q9BXU7 913 aa11.32□□□□□ -0.6
SPCS1-205ENST00000602728 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
SPCS1-205ENST00000602728 IGLV3-22A0A075B6J6 115 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 SMAPO00193 183 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 TLL1O43897 1013 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 LGR5O75473 907 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 CCNE2O96020 404 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 PDIA3P30101 505 aaKnown RBP11.31□□□□□ -0.6
SPCS1-205ENST00000602728 ACTR2P61160 394 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 TAP1Q03518 808 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 KCNC4Q03721 635 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 GRIK4Q16099 956 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 CEP55Q53EZ4 464 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 DBF4BQ8NFT6 615 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 GDPD5Q8WTR4 605 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 ARNTL2Q8WYA1 636 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 GLG1Q92896 1179 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 CDHR1Q96JP9 859 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 COL25A1Q9BXS0 654 aaPredicted RBP11.31□□□□□ -0.6
SPCS1-205ENST00000602728 PPP4R2Q9NY27 417 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 SLC9A2Q9UBY0 812 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 MTUS1Q9ULD2 1270 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 PLXNA4Q9HCM2 1894 aa11.31□□□□□ -0.6
SPCS1-205ENST00000602728 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 ESYT2A0FGR8 921 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 GHRP10912 638 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 PSMA5P28066 241 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 MARCH8Q5T0T0 291 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 PLA2G4DQ86XP0 818 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 REXO1Q8N1G1 1221 aaKnown RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 GIMAP8Q8ND71 665 aaPredicted RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 CRYGNQ8WXF5 182 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 SEPT1Q8WYJ6 367 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 SDF4Q9BRK5 362 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 ZMYND12Q9H0C1 365 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
SPCS1-205ENST00000602728 ERAP1Q9NZ08 941 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 A0A0C4DFX4 3053 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 NFASCO94856 1347 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 CUL9Q8IWT3 2517 aa11.3□□□□□ -0.6
SPCS1-205ENST00000602728 MEIS1O00470 390 aa11.29□□□□□ -0.6
SPCS1-205ENST00000602728 EDIL3O43854 480 aa11.29□□□□□ -0.6
SPCS1-205ENST00000602728 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
SPCS1-205ENST00000602728 IFNAR1P17181 557 aa11.29□□□□□ -0.6
SPCS1-205ENST00000602728 ZNF76P36508 570 aa11.29□□□□□ -0.6
SPCS1-205ENST00000602728 PRSS12P56730 875 aa11.29□□□□□ -0.6
SPCS1-205ENST00000602728 MGAT3Q09327 533 aa11.29□□□□□ -0.6
SPCS1-205ENST00000602728 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms