RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ZNF76P36508 570 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 CARSP49589 748 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 SPA17Q15506 151 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 QRICH1Q2TAL8 776 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 DTHD1Q6ZMT9 781 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 OR8K1Q8NGG5 319 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 GGT7Q9UJ14 662 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 SCN7AQ01118 1682 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 GCOM1H8Y6P7 765 aaPredicted RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 DDX39AO00148 427 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 STXBP3O00186 592 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 NFKBIEO00221 500 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 PDHA1P08559 390 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 FGRP09769 529 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 MYZAPP0CAP1 466 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 HMGB2P26583 209 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 SP4Q02446 784 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 NPY5RQ15761 445 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 RESP18Q5W5W9 173 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 MAB21L3Q8N8X9 362 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 OR2W6PQ8NHA6 318 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 OSBPL9Q96SU4 736 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 PSTPIP2Q9H939 334 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 TBC1D7Q9P0N9 293 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 PDS5AQ29RF7 1337 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 LRP5O75197 1615 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 TTLL12Q14166 644 aaPredicted RBP16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 KLHL23Q8NBE8 558 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 ATP6V1G3Q96LB4 118 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 ZSCAN5CA6NGD5 496 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 PTPREP23469 700 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 CALML3P27482 149 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 STAT6P42226 847 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 TAF11Q15544 211 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 IFT20Q8IY31 132 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 OSBPL1AQ9BXW6 950 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 LACRTQ9GZZ8 138 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 ZNF233A6NK53 670 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 DDNO94850 711 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 CYLC1P35663 651 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 NONOQ15233 471 aaKnown RBP eCLIP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 CDC37Q16543 378 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 LRRC23Q53EV4 343 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 ANKS4BQ8N8V4 417 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 MYOZ2Q9NPC6 264 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 HOMER3Q9NSC5 361 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 FAM153AQ9UHL3 310 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 CTDP1Q9Y5B0 961 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 ATXN2Q99700 1313 aaKnown RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 CEP350Q5VT06 3117 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 LAMB2P55268 1798 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 TACC1O75410 805 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 ADCY7P51828 1080 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 PLS1Q14651 629 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 NBPF12Q5TAG4 269 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 EZH1Q92800 747 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 TSGA10Q9BZW7 698 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 CHCHD3Q9NX63 227 aaKnown RBP16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 PLAAQ9Y263 795 aa16.75■□□□□ 0.27
PPFIA3-206ENST00000602655 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 PAK2Q13177 524 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 KRT31Q15323 416 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 HHATQ5VTY9 493 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 NFRKBQ6P4R8 1299 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 CDK5RAP3Q96JB5 506 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 SH2D3AQ9BRG2 576 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 GOPCQ9HD26 462 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 ZBTB21Q9ULJ3 1066 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 HEXIM1O94992 359 aaKnown RBP16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 GABPAQ06546 454 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 KCTD19Q17RG1 926 aaPredicted RBP16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 AGAP11Q8TF27 550 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 MED15Q96RN5 788 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 TRIM4Q9C037 500 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 BCORQ6W2J9 1755 aa16.74■□□□□ 0.27
PPFIA3-206ENST00000602655 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 EPS15P42566 896 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms