RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 TRPV2Q9Y5S1 764 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 MRPL42Q9Y6G3 142 aaKnown RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 SCN10AQ9Y5Y9 1956 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 FASNP49327 2511 aaKnown RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 EP300Q09472 2414 aaPredicted RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 CEP250Q9BV73 2442 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 ZNF292O60281 2723 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 hCG_1642624A0A1W2PR95 340 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 TMEM221A6NGB7 291 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 M0R296 226 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 ENPP3O14638 875 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 PER2O15055 1255 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 TBX10O75333 385 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 CHRNA1P02708 482 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 MMP1P03956 469 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 HOXD8P13378 290 aaPredicted RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 SCG2P13521 617 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 INSRRP14616 1297 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 RXRAP19793 462 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 RFX1P22670 979 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 GNAQP50148 359 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 GATMP50440 423 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 MRPS9P82933 396 aaKnown RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 KRT76Q01546 638 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 UBE2SQ16763 222 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 PLPP4Q5VZY2 271 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 PCNX4Q63HM2 1172 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 NPAS4Q8IUM7 802 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 PLEKHM2Q8IWE5 1019 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 SMC5Q8IY18 1101 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 ZNF654Q8IZM8 581 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 ABI1Q8IZP0 508 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 CMTR1Q8N1G2 835 aaKnown RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 METTL13Q8N6R0 699 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 KLHL23Q8NBE8 558 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 TRAPPC12Q8WVT3 735 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 POF1BQ8WVV4 589 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 INPP4AQ96PE3 977 aaPredicted RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 PLVAPQ9BX97 442 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 FTHL17Q9BXU8 183 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 MFSD1Q9H3U5 465 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 RIOX1Q9H6W3 641 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 JPH1Q9HDC5 661 aaPredicted RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 PLAGL2Q9UPG8 496 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 USP15Q9Y4E8 981 aaPredicted RBP5.93□□□□□ -1.46
VRK3-226ENST00000602029 USP24Q9UPU5 2620 aa5.93□□□□□ -1.46
VRK3-226ENST00000602029 RRN3P2A6NIE6 340 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 E7EWF7 191 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 RPS6KA5O75582 802 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 PLEKHA8P1O95397 391 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 RPLP2P05387 115 aaKnown RBP5.92□□□□□ -1.46
VRK3-226ENST00000602029 ITGB1P05556 798 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 ICAM3P32942 547 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 DEKP35659 375 aaKnown RBP5.92□□□□□ -1.46
VRK3-226ENST00000602029 TECP42680 631 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 NAPAP54920 295 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 FGD1P98174 961 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 NUCB1Q02818 461 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 SEC23AQ15436 765 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 FAM26DQ5JW98 314 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 FBXO47Q5MNV8 452 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 ODR4Q5SWX8 454 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 FAM160B1Q5W0V3 765 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 XRRA1Q6P2D8 792 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 TRIM67Q6ZTA4 783 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 ASCL5Q7RTU5 278 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 ADGRD2Q7Z7M1 963 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 MICU3Q86XE3 530 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 CMTR2Q8IYT2 770 aaKnown RBP5.92□□□□□ -1.46
VRK3-226ENST00000602029 EDAQ92838 391 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 GPRASP2Q96D09 838 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 PGBD1Q96JS3 809 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 NEK1Q96PY6 1258 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 PRRX2Q99811 253 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 SENP7Q9BQF6 1050 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 LZTS2Q9BRK4 669 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 ATP6V0A4Q9HBG4 840 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 SENP2Q9HC62 589 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 TMEM260Q9NX78 707 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 SLC9A2Q9UBY0 812 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 PUF60Q9UHX1 559 aaKnown RBP5.92□□□□□ -1.46
VRK3-226ENST00000602029 PADI3Q9ULW8 664 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 TELO2Q9Y4R8 837 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 SAMM50Q9Y512 469 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 PCDHGC5Q9Y5F6 944 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 SLC12A7Q9Y666 1083 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 MYO10Q9HD67 2058 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 NLRC5Q86WI3 1866 aa5.92□□□□□ -1.46
VRK3-226ENST00000602029 C19orf67A6NJJ6 358 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 C5orf67F2Z3F1 127 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 STK25O00506 426 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 PRC1O43663 620 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 CYTH3O43739 400 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 ATP9AO75110 1047 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 DGKIO75912 1065 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 DDAH1O94760 285 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 IGHDP01880 384 aa5.91□□□□□ -1.46
VRK3-226ENST00000602029 CYP21A2P08686 494 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms