RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 KLHL23Q8NBE8 558 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 PPP1R16BQ96T49 567 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 SDF4Q9BRK5 362 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 PLVAPQ9BX97 442 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 UPF3BQ9BZI7 483 aaKnown RBP9.52□□□□□ -0.89
CCDC9-206ENST00000601154 KCNH7Q9NS40 1196 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 CD207Q9UJ71 328 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 LRFN2Q9ULH4 789 aa9.52□□□□□ -0.89
CCDC9-206ENST00000601154 MUC6Q6W4X9 2439 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 BACH1O14867 736 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 STAG3L1P0CL83 205 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 STAT5BP51692 787 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 KRT76Q01546 638 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 ITGB3BPQ13352 177 aaPredicted RBP9.51□□□□□ -0.89
CCDC9-206ENST00000601154 ADAM15Q13444 863 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 SPOUT1Q5T280 376 aaKnown RBP9.51□□□□□ -0.89
CCDC9-206ENST00000601154 CREB3L3Q68CJ9 461 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 TMTC2Q8N394 836 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 FANCBQ8NB91 859 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 SPPL3Q8TCT6 385 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 POF1BQ8WVV4 589 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 P2RX5Q93086 422 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 FBXL18Q96ME1 805 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 POP1Q99575 1024 aaKnown RBP9.51□□□□□ -0.89
CCDC9-206ENST00000601154 MXRA8Q9BRK3 442 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 FTHL17Q9BXU8 183 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 ANO3Q9BYT9 981 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 CELF4Q9BZC1 486 aaKnown RBP9.51□□□□□ -0.89
CCDC9-206ENST00000601154 LSG1Q9H089 658 aaKnown RBP9.51□□□□□ -0.89
CCDC9-206ENST00000601154 TMX1Q9H3N1 280 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 ANO2Q9NQ90 1003 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 TMEM260Q9NX78 707 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 BARX2Q9UMQ3 279 aaPredicted RBP9.51□□□□□ -0.89
CCDC9-206ENST00000601154 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 IGSF9BQ9UPX0 1349 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 NLRC5Q86WI3 1866 aa9.51□□□□□ -0.89
CCDC9-206ENST00000601154 MAFGO15525 162 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 MGEA5O60502 916 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 CCNE2O96020 404 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 RPLP2P05387 115 aaKnown RBP9.5□□□□□ -0.89
CCDC9-206ENST00000601154 ZNF76P36508 570 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 LIFRP42702 1097 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 MRE11P49959 708 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 RBM10P98175 930 aaKnown RBP9.5□□□□□ -0.89
CCDC9-206ENST00000601154 NHLH1Q02575 133 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 MTHFD1LQ6UB35 978 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 TRMT1LQ7Z2T5 733 aaKnown RBP9.5□□□□□ -0.89
CCDC9-206ENST00000601154 MICAL1Q8TDZ2 1067 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 MTA3Q9BTC8 594 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 AGO4Q9HCK5 861 aaKnown RBP9.5□□□□□ -0.89
CCDC9-206ENST00000601154 CLEC1BQ9P126 229 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 PCDHA2Q9Y5H9 948 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 RALGAPA2Q2PPJ7 1873 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 MYO7AQ13402 2215 aa9.5□□□□□ -0.89
CCDC9-206ENST00000601154 SMIM35A0A1B0GVV1 85 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 DENND3A2RUS2 1198 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 TBKBP1A7MCY6 615 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 PER2O15055 1255 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 GLP2RO95838 553 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 KLRC1P26715 233 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 SARSP49591 514 aaKnown RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 ADCY7P51828 1080 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 RTN1Q16799 776 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 CEP55Q53EZ4 464 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 HERC4Q5GLZ8 1057 aaPredicted RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 APOA5Q6Q788 366 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 PLPPR4Q7Z2D5 763 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 CCDC60Q8IWA6 550 aaPredicted RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 CRIPAKQ8N1N5 446 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 EFHBQ8N7U6 833 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 TMEM40Q8WWA1 233 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 TNPO1Q92973 898 aaKnown RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 RPGRIP1Q96KN7 1286 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 ESYT1Q9BSJ8 1104 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 TLE6Q9H808 572 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 RIC8AQ9NPQ8 531 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 NAP1L2Q9ULW6 460 aaPredicted RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 NOC2LQ9Y3T9 749 aaKnown RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
CCDC9-206ENST00000601154 PCDHB7Q9Y5E2 793 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 SQORQ9Y6N5 450 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 NFASCO94856 1347 aa9.49□□□□□ -0.89
CCDC9-206ENST00000601154 ATG2AQ2TAZ0 1938 aa9.48□□□□□ -0.89
CCDC9-206ENST00000601154 SMCO2A6NFE2 343 aa9.48□□□□□ -0.89
CCDC9-206ENST00000601154 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
CCDC9-206ENST00000601154 GOLGA8BA8MQT2 603 aa9.48□□□□□ -0.89
CCDC9-206ENST00000601154 ZBTB43O43298 467 aa9.48□□□□□ -0.89
CCDC9-206ENST00000601154 FGFR1P11362 822 aa9.48□□□□□ -0.89
CCDC9-206ENST00000601154 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms