RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 GH1P01241 217 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 CD4P01730 458 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 MMP3P08254 477 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 CLTBP09497 229 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 TGFB3P10600 412 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
ZNF548-211ENST00000600927 MUTP22033 750 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
ZNF548-211ENST00000600927 ITGB8P26012 769 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 SP2Q02086 613 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 HS1BP3Q53T59 392 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 CABP7Q86V35 215 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 RNF214Q8ND24 703 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 HAS1Q92839 578 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 DHX58Q96C10 678 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 NT5C3AQ9H0P0 336 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 CBX8Q9HC52 389 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 A0A087X0B3 334 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 BECN2A8MW95 431 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 GOLGA6L19H0YKK7 550 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 SLC37A4O43826 429 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 MARCH6O60337 910 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 KPNA6O60684 536 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 STAT6P42226 847 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 TECP42680 631 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 TXKP42681 527 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 TPM4P67936 248 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 DPYDQ12882 1025 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 PNOCQ13519 176 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 ITGA7Q13683 1181 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 MORC3Q14149 939 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 KRT79Q5XKE5 535 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 PDILTQ8N807 584 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 PPTC7Q8NI37 304 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
ZNF548-211ENST00000600927 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-211ENST00000600927 KDM3AQ9Y4C1 1321 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 TRIOBPQ9H2D6 2365 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 DCDC2CA8MYV0 355 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 SPATA31C2B4DYI2 1134 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 MAFGO15525 162 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-211ENST00000600927 PPP1R2P41236 205 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 PSMC6P62333 389 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 SETQ01105 290 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-211ENST00000600927 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 KCNB1Q14721 858 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-211ENST00000600927 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
ZNF548-211ENST00000600927 SARM1Q6SZW1 724 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 KAT2BQ92831 832 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-211ENST00000600927 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 UBIAD1Q9Y5Z9 338 aa12.88□□□□□ -0.35
ZNF548-211ENST00000600927 MEIS1O00470 390 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 GGPS1O95749 300 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 F2P00734 622 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 MYL3P08590 195 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 ITGB5P18084 799 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 ZNF76P36508 570 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZNF548-211ENST00000600927 HSDL1Q3SXM5 330 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 NAALADL2Q58DX5 795 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 HAUS3Q68CZ6 603 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 ERMNQ8TAM6 284 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
ZNF548-211ENST00000600927 LENG9Q96B70 501 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 GPRASP2Q96D09 838 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-211ENST00000600927 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 SENP7Q9BQF6 1050 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
ZNF548-211ENST00000600927 PRDM5Q9NQX1 630 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-211ENST00000600927 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
ZNF548-211ENST00000600927 IGLV3-22A0A075B6J6 115 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 HAS3O00219 553 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
ZNF548-211ENST00000600927 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
ZNF548-211ENST00000600927 DGKDQ16760 1214 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 METTL7BQ6UX53 244 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
ZNF548-211ENST00000600927 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
ZNF548-211ENST00000600927 SESTD1Q86VW0 696 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
ZNF548-211ENST00000600927 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 ENOX1Q8TC92 643 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms