RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
HIF3A-218ENST00000600383 SLC25A27O95847 323 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 PBX1P40424 430 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 PSMC5P62195 406 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 MAF1Q9H063 256 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 PARVGQ9HBI0 331 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 NMRK2Q9NPI5 230 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 SOWAHBA6NEL2 793 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 SPATA31C2B4DYI2 1134 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 FKBP3Q00688 224 aaKnown RBP16.78■□□□□ 0.28
HIF3A-218ENST00000600383 SP2Q02086 613 aa16.78■□□□□ 0.28
HIF3A-218ENST00000600383 JPH1Q9HDC5 661 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-218ENST00000600383 CCL15-CCL14A0A0B4J2E2 113 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 PDHXO00330 501 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 CETPP11597 493 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 GAP43P17677 238 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
HIF3A-218ENST00000600383 CASP14P31944 242 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 KCTD2Q14681 263 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 CCL15Q16663 113 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 ZNF746Q6NUN9 644 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-218ENST00000600383 SWSAP1Q6NVH7 229 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 CYFIP1Q7L576 1253 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 TC2NQ8N9U0 490 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 KCTD10Q9H3F6 313 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 TRMT1Q9NXH9 659 aaKnown RBP16.77■□□□□ 0.28
HIF3A-218ENST00000600383 GABBR1Q9UBS5 961 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 SLC9A2Q9UBY0 812 aa16.77■□□□□ 0.28
HIF3A-218ENST00000600383 KIAA1217Q5T5P2 1943 aa16.77■□□□□ 0.27
HIF3A-218ENST00000600383 LGALS16A8MUM7 142 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 AKR1B15C9JRZ8 316 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-218ENST00000600383 RARRES1P49788 294 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 GTF2A2P52657 109 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 KCNA1Q09470 495 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 TBC1D8BQ0IIM8 1120 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 KNOP1Q1ED39 458 aaKnown RBP16.76■□□□□ 0.27
HIF3A-218ENST00000600383 ZCWPW2Q504Y3 356 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 MS4A4AQ96JQ5 239 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 KCND2Q9NZV8 630 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 USO1O60763 962 aaKnown RBP16.76■□□□□ 0.27
HIF3A-218ENST00000600383 HIP1RO75146 1068 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 NPEPPSP55786 919 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 ERVK-9P63128 1117 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 ERVK-24P63145 666 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 ADAM9Q13443 819 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-218ENST00000600383 XKR9Q5GH70 373 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 LRRC55Q6ZSA7 311 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 C4orf19Q8IY42 314 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 MMP19Q99542 508 aa16.76■□□□□ 0.27
HIF3A-218ENST00000600383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.76■□□□□ 0.27
HIF3A-218ENST00000600383 BTBD19C9JJ37 291 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 HOXD13P35453 343 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 DNM2P50570 870 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 ACTR2P61160 394 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 FKBP1BP68106 108 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 KSR1Q8IVT5 923 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 FAM178BQ8IXR5 827 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 ANKRD13CQ8N6S4 541 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 ZNF507Q8TCN5 953 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 PCMTD1Q96MG8 357 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-218ENST00000600383 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-218ENST00000600383 PORCNQ9H237 461 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 OLFML3Q9NRN5 406 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 DBR1Q9UK59 544 aaKnown RBP16.75■□□□□ 0.27
HIF3A-218ENST00000600383 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 USP27XA6NNY8 438 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 BACH1O14867 736 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 GYPCP04921 128 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 PSAPP07602 524 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 TPM1P09493 284 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 GUCY2CP25092 1073 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 CCDC40Q4G0X9 1142 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 EPM2AIP1Q7L775 607 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-218ENST00000600383 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-218ENST00000600383 CCDC112Q8NEF3 446 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 ODF2LQ9ULJ1 636 aa16.75■□□□□ 0.27
HIF3A-218ENST00000600383 LYPLA2O95372 231 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 NR2F2P24468 414 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 FXR1P51114 621 aaKnown RBP eCLIP16.74■□□□□ 0.27
HIF3A-218ENST00000600383 MIIPQ5JXC2 388 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 RDM1Q8NG50 284 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 SENP7Q9BQF6 1050 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 MROH8Q9H579 483 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 NFASCO94856 1347 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 A0A0G2JMZ2 1700 aa16.74■□□□□ 0.27
HIF3A-218ENST00000600383 LCTP09848 1927 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 VWA3BQ502W6 1294 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 ANO5Q75V66 913 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 ZNF720Q7Z2F6 126 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 GPRC5AQ8NFJ5 357 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 IKZF4Q9H2S9 585 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms