RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ARHGEF35A5YM69 484 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 INPP5BP32019 993 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 RASA3Q14644 834 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 EXOC3L4Q17RC7 722 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 JDP2Q8WYK2 163 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 FUT8Q9BYC5 575 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 TRIM66O15016 1216 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 NR3C1P04150 777 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 ELMO3Q96BJ8 720 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 ASTN2O75129 1339 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 A0A087X0T9 212 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 LRRN2O75325 713 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 FAM228BP0C875 321 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 TRIM58Q8NG06 486 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 RIN2Q8WYP3 895 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 BAP1Q92560 729 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 SLX4Q8IY92 1834 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 TISP43B9A030 160 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 H3BQF6 201 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 ABCB4P21439 1286 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 FECHP22830 423 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 AMPD2Q01433 879 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 SPIRE1Q08AE8 756 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 CEP55Q53EZ4 464 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 SYT2Q8N9I0 419 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 HDAC7Q8WUI4 952 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 HERC5Q9UII4 1024 aaKnown RBP12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 MYH7BA7E2Y1 1941 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 SCN9AQ15858 1988 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
ARHGEF1-220ENST00000600274 IPO5O00410 1097 aaKnown RBP12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 PALMO75781 387 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 GFPT2O94808 682 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 PAFAH1B1P43034 410 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 CXCL9Q07325 125 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 BRD3Q15059 726 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 HDXQ7Z353 690 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 IFT81Q8WYA0 676 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 FAM20AQ96MK3 541 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 NOX5Q96PH1 765 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 LXNQ9BS40 222 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 SH2D4AQ9H788 454 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 VCPKMTQ9H867 229 aa12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.39
ARHGEF1-220ENST00000600274 ESYT3A0FGR9 886 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 TLR2O60603 784 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 IL31RAQ8NI17 732 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 TSGA10Q9BZW7 698 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 KCTD10Q9H3F6 313 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 UNC45AQ9H3U1 944 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 EXOC3O60645 756 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 SLITRK3O94933 977 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 KLRC1P26715 233 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 CASP8Q14790 479 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 ZCWPW2Q504Y3 356 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 MIER3Q7Z3K6 550 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 CWC15Q9P013 229 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 CEP72Q9P209 647 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 WRAP73Q9P2S5 460 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
ARHGEF1-220ENST00000600274 K7ENM7 598 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 WNT10BO00744 389 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 NOL4O94818 638 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 BEND6Q5SZJ8 279 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 KLHL7Q8IXQ5 586 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 VAV3Q9UKW4 847 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 GOLGA8IPA6NC78 632 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 GOLGA8JA6NMD2 632 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 PTK2Q05397 1052 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 PRPF4BQ13523 1007 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 ADAT2Q7Z6V5 191 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-220ENST00000600274 TXLNBQ8N3L3 684 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms