RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CASP10Q92851 521 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 NGRNQ9NPE2 291 aaKnown RBP20.44■□□□□ 0.86
SSBP4-207ENST00000600244 USTQ9Y2C2 406 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 FGAP02671 866 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 HOXA13P31271 388 aaPredicted RBP20.43■□□□□ 0.86
SSBP4-207ENST00000600244 SPOUT1Q5T280 376 aaKnown RBP20.43■□□□□ 0.86
SSBP4-207ENST00000600244 DGKHQ86XP1 1220 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 INPP4AQ96PE3 977 aaPredicted RBP20.43■□□□□ 0.86
SSBP4-207ENST00000600244 TCF25Q9BQ70 676 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 TMX1Q9H3N1 280 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 VAT1LQ9HCJ6 419 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 ERVK-5Q9HDB9 667 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 HCSTQ9UBK5 93 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 TUBE1Q9UJT0 475 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 LRFN2Q9ULH4 789 aa20.43■□□□□ 0.86
SSBP4-207ENST00000600244 GPR179Q6PRD1 2367 aa20.42■□□□□ 0.86
SSBP4-207ENST00000600244 FNDC1Q4ZHG4 1894 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-207ENST00000600244 SARSP49591 514 aaKnown RBP20.42■□□□□ 0.86
SSBP4-207ENST00000600244 MRPS9P82933 396 aaKnown RBP20.42■□□□□ 0.86
SSBP4-207ENST00000600244 PPFIA1Q13136 1202 aa20.42■□□□□ 0.86
SSBP4-207ENST00000600244 AMNQ9BXJ7 453 aa20.42■□□□□ 0.86
SSBP4-207ENST00000600244 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
SSBP4-207ENST00000600244 TYW1Q9NV66 732 aaKnown RBP20.42■□□□□ 0.86
SSBP4-207ENST00000600244 HCFC2Q9Y5Z7 792 aa20.42■□□□□ 0.86
SSBP4-207ENST00000600244 MYH6P13533 1939 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 GRIK4Q16099 956 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 ASPRV1Q53RT3 343 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 CWH43Q9H720 699 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 PUF60Q9UHX1 559 aaKnown RBP20.41■□□□□ 0.86
SSBP4-207ENST00000600244 PCDHB7Q9Y5E2 793 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 ATRXP46100 2492 aa20.41■□□□□ 0.86
SSBP4-207ENST00000600244 USP24Q9UPU5 2620 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 TBKBP1A7MCY6 615 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 PPP1R11O60927 126 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-207ENST00000600244 RPLP2P05387 115 aaKnown RBP20.4■□□□□ 0.86
SSBP4-207ENST00000600244 WEE2P0C1S8 567 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 GNPTABQ3T906 1256 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 FAM102BQ5T8I3 360 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 IER5Q5VY09 327 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 PI4K2BQ8TCG2 481 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 HINFPQ9BQA5 517 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 ENTPD7Q9NQZ7 604 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 CYP26B1Q9NR63 512 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 RNF216Q9NWF9 866 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-207ENST00000600244 IGSF9BQ9UPX0 1349 aa20.4■□□□□ 0.86
SSBP4-207ENST00000600244 DOCK5Q9H7D0 1870 aa20.39■□□□□ 0.86
SSBP4-207ENST00000600244 EOMESO95936 686 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 TDGQ13569 410 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 KIAA1841Q6NSI8 718 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 SIX5Q8N196 739 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 ZKSCAN3Q9BRR0 538 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 DUSP12Q9UNI6 340 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 PCDHA1Q9Y5I3 950 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 TRPV2Q9Y5S1 764 aa20.39■□□□□ 0.85
SSBP4-207ENST00000600244 FANCMQ8IYD8 2048 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 FIBPO43427 364 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 DHX16O60231 1041 aaKnown RBP20.38■□□□□ 0.85
SSBP4-207ENST00000600244 STAM2O75886 525 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 PCP11498 1178 aaKnown RBP20.38■□□□□ 0.85
SSBP4-207ENST00000600244 ATXN1P54253 815 aaKnown RBP20.38■□□□□ 0.85
SSBP4-207ENST00000600244 PAK2Q13177 524 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 FAM43BQ6ZT52 329 aaPredicted RBP20.38■□□□□ 0.85
SSBP4-207ENST00000600244 MRPL43Q8N983 215 aaKnown RBP20.38■□□□□ 0.85
SSBP4-207ENST00000600244 SUMF1Q8NBK3 374 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 ZBTB10Q96DT7 871 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 MTMR8Q96EF0 704 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 SENP7Q9BQF6 1050 aa20.38■□□□□ 0.85
SSBP4-207ENST00000600244 TTC41PQ6P2S7 1318 aa20.37■□□□□ 0.85
SSBP4-207ENST00000600244 MGEA5O60502 916 aa20.37■□□□□ 0.85
SSBP4-207ENST00000600244 LAG3P18627 525 aa20.37■□□□□ 0.85
SSBP4-207ENST00000600244 ATAT1Q5SQI0 421 aa20.37■□□□□ 0.85
SSBP4-207ENST00000600244 FCHSD1Q86WN1 690 aa20.37■□□□□ 0.85
SSBP4-207ENST00000600244 C12orf76Q8N812 135 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-207ENST00000600244 RIN2Q8WYP3 895 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-207ENST00000600244 FAM49AQ9H0Q0 323 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-207ENST00000600244 DBR1Q9UK59 544 aaKnown RBP20.37■□□□□ 0.85
SSBP4-207ENST00000600244 FRMPD4Q14CM0 1322 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 KDM3AQ9Y4C1 1321 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 GCOM1H8Y6P7 765 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-207ENST00000600244 CLASP2O75122 1294 aaKnown RBP20.36■□□□□ 0.85
SSBP4-207ENST00000600244 POLR2MP0CAP2 368 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 SP9P0CG40 484 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 SDHBP21912 280 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 TCF7P36402 384 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-207ENST00000600244 HAND2P61296 217 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 SP4Q02446 784 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 RARS2Q5T160 578 aaKnown RBP20.36■□□□□ 0.85
SSBP4-207ENST00000600244 KIAA0319Q5VV43 1072 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 KANK3Q6NY19 840 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 ZC3H14Q6PJT7 736 aaKnown RBP20.36■□□□□ 0.85
SSBP4-207ENST00000600244 MFSD6Q6ZSS7 791 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 TMC7Q7Z402 723 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 CELF4Q9BZC1 486 aaKnown RBP20.36■□□□□ 0.85
SSBP4-207ENST00000600244 ERAP1Q9NZ08 941 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 RTEL1Q9NZ71 1219 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 FBXL21Q9UKT6 434 aa20.36■□□□□ 0.85
SSBP4-207ENST00000600244 C2orf71A6NGG8 1288 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 C9IYK1 514 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 PARP1P09874 1014 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms