RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ATG7O95352 703 aa21.29■■□□□ 1
PNKP-213ENST00000599543 FAM86B2P0C5J1 330 aa21.29■■□□□ 1
PNKP-213ENST00000599543 GNA11P29992 359 aa21.29■■□□□ 1
PNKP-213ENST00000599543 FAM160B1Q5W0V3 765 aa21.29■■□□□ 1
PNKP-213ENST00000599543 FBXL16Q8N461 479 aa21.29■■□□□ 1
PNKP-213ENST00000599543 FIBCD1Q8N539 461 aa21.29■■□□□ 1
PNKP-213ENST00000599543 TRAPPC12Q8WVT3 735 aa21.29■■□□□ 1
PNKP-213ENST00000599543 MRPL38Q96DV4 380 aaKnown RBP21.29■■□□□ 1
PNKP-213ENST00000599543 PCDHA2Q9Y5H9 948 aa21.29■■□□□ 1
PNKP-213ENST00000599543 WDR81Q562E7 1941 aa21.28■■□□□ 1
PNKP-213ENST00000599543 H3BNC9 293 aa21.28■■□□□ 1
PNKP-213ENST00000599543 IPO5O00410 1097 aaKnown RBP21.28■■□□□ 1
PNKP-213ENST00000599543 PRPF3O43395 683 aaKnown RBP21.28■■□□□ 1
PNKP-213ENST00000599543 CCNE2O96020 404 aa21.28■■□□□ 1
PNKP-213ENST00000599543 CD52P31358 61 aa21.28■■□□□ 1
PNKP-213ENST00000599543 SETQ01105 290 aaPredicted RBP21.28■■□□□ 1
PNKP-213ENST00000599543 TMEM62Q0P6H9 643 aa21.28■■□□□ 1
PNKP-213ENST00000599543 GPM6BQ13491 265 aa21.28■■□□□ 1
PNKP-213ENST00000599543 PHKBQ93100 1093 aa21.28■■□□□ 1
PNKP-213ENST00000599543 UPF3BQ9BZI7 483 aaKnown RBP21.28■■□□□ 1
PNKP-213ENST00000599543 TRPV2Q9Y5S1 764 aa21.28■■□□□ 1
PNKP-213ENST00000599543 MYO7AQ13402 2215 aa21.28■■□□□ 1
PNKP-213ENST00000599543 ADGRA3Q8IWK6 1321 aa21.28■■□□□ 1
PNKP-213ENST00000599543 IGLV3-22A0A075B6J6 115 aa21.27■■□□□ 1
PNKP-213ENST00000599543 IGKV6D-21A0A0A0MT36 114 aa21.27■■□□□ 1
PNKP-213ENST00000599543 ENPP3O14638 875 aa21.27■■□□□ 1
PNKP-213ENST00000599543 CYP3A4P08684 503 aa21.27■■□□□ 1
PNKP-213ENST00000599543 PKN1Q16512 942 aa21.27■■□□□ 1
PNKP-213ENST00000599543 TIGD5Q53EQ6 642 aa21.27■■□□□ 1
PNKP-213ENST00000599543 MIS18BP1Q6P0N0 1132 aa21.27■■□□□ 1
PNKP-213ENST00000599543 MTHFD1LQ6UB35 978 aa21.27■■□□□ 1
PNKP-213ENST00000599543 ABHD15Q6UXT9 468 aa21.27■■□□□ 1
PNKP-213ENST00000599543 CCDC148Q8NFR7 591 aa21.27■■□□□ 1
PNKP-213ENST00000599543 BICD2Q8TD16 824 aa21.27■■□□□ 1
PNKP-213ENST00000599543 CRYGNQ8WXF5 182 aa21.27■■□□□ 1
PNKP-213ENST00000599543 ZNF577Q9BSK1 485 aa21.27■■□□□ 1
PNKP-213ENST00000599543 FTHL17Q9BXU8 183 aa21.27■■□□□ 1
PNKP-213ENST00000599543 AGXT2Q9BYV1 514 aa21.27■■□□□ 1
PNKP-213ENST00000599543 UBE2ZQ9H832 354 aaPredicted RBP21.27■■□□□ 1
PNKP-213ENST00000599543 AGO3Q9H9G7 860 aaKnown RBP21.27■■□□□ 1
PNKP-213ENST00000599543 ZNF302Q9NR11 478 aa21.27■■□□□ 1
PNKP-213ENST00000599543 TCEAL9Q9UHQ7 104 aa21.27■■□□□ 1
PNKP-213ENST00000599543 RWDD3Q9Y3V2 267 aa21.27■■□□□ 1
PNKP-213ENST00000599543 SQORQ9Y6N5 450 aa21.27■■□□□ 1
PNKP-213ENST00000599543 ATG2AQ2TAZ0 1938 aa21.27■■□□□ 1
PNKP-213ENST00000599543 SMIM35A0A1B0GVV1 85 aa21.26■□□□□ 0.99
PNKP-213ENST00000599543 CTNNB1P35222 781 aa21.26■□□□□ 0.99
PNKP-213ENST00000599543 PAK2Q13177 524 aa21.26■□□□□ 0.99
PNKP-213ENST00000599543 CCDC60Q8IWA6 550 aaPredicted RBP21.26■□□□□ 0.99
PNKP-213ENST00000599543 ATP8B4Q8TF62 1192 aa21.26■□□□□ 0.99
PNKP-213ENST00000599543 RNF26Q9BY78 433 aaPredicted RBP21.26■□□□□ 0.99
PNKP-213ENST00000599543 TBC1D22BQ9NU19 505 aa21.26■□□□□ 0.99
PNKP-213ENST00000599543 IGSF9BQ9UPX0 1349 aa21.26■□□□□ 0.99
PNKP-213ENST00000599543 HBP1O60381 514 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 PPFIA3O75145 1194 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 KRT76Q01546 638 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 PDXDC2PQ6P474 469 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 NME8Q8N427 588 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 UIMC1Q96RL1 719 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 LARP6Q9BRS8 491 aaKnown RBP21.25■□□□□ 0.99
PNKP-213ENST00000599543 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 CELF4Q9BZC1 486 aaKnown RBP21.25■□□□□ 0.99
PNKP-213ENST00000599543 KIAA1671Q9BY89 1806 aa21.25■□□□□ 0.99
PNKP-213ENST00000599543 COL1A2P08123 1366 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 ADAMTS3O15072 1205 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 DHX15O43143 795 aaKnown RBP21.24■□□□□ 0.99
PNKP-213ENST00000599543 EPB41L2O43491 1005 aaKnown RBP21.24■□□□□ 0.99
PNKP-213ENST00000599543 KCNA5P22460 613 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 KLRC1P26715 233 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 BTG3Q14201 252 aaPredicted RBP21.24■□□□□ 0.99
PNKP-213ENST00000599543 PRR16Q569H4 304 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 SWSAP1Q6NVH7 229 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 CKAP2LQ8IYA6 745 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 BANK1Q8NDB2 785 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 C11orf84Q9BUA3 381 aaPredicted RBP21.24■□□□□ 0.99
PNKP-213ENST00000599543 RC3H2Q9HBD1 1191 aaKnown RBP21.24■□□□□ 0.99
PNKP-213ENST00000599543 PADI3Q9ULW8 664 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 KDM3AQ9Y4C1 1321 aa21.24■□□□□ 0.99
PNKP-213ENST00000599543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.23■□□□□ 0.99
PNKP-213ENST00000599543 C5orf67F2Z3F1 127 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 IFNAR1P17181 557 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 CCT2P78371 535 aaKnown RBP21.23■□□□□ 0.99
PNKP-213ENST00000599543 NTRK3Q16288 839 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 ZNF746Q6NUN9 644 aaPredicted RBP21.23■□□□□ 0.99
PNKP-213ENST00000599543 SMAP1Q8IYB5 467 aaPredicted RBP21.23■□□□□ 0.99
PNKP-213ENST00000599543 RASGRP4Q8TDF6 673 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 LINC01599Q8WXQ3 324 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 NCOA5Q9HCD5 579 aaKnown RBP21.23■□□□□ 0.99
PNKP-213ENST00000599543 VPS54Q9P1Q0 977 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 GINS2Q9Y248 185 aa21.23■□□□□ 0.99
PNKP-213ENST00000599543 DGKIO75912 1065 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 RB1P06400 928 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 PDIA3P30101 505 aaKnown RBP21.22■□□□□ 0.99
PNKP-213ENST00000599543 BMPR1AP36894 532 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 ZNF484Q5JVG2 852 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 RUFY3Q7L099 469 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 NPAS4Q8IUM7 802 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 TRIM22Q8IYM9 498 aa21.22■□□□□ 0.99
PNKP-213ENST00000599543 ZNF689Q96CS4 500 aaPredicted RBP21.22■□□□□ 0.99
PNKP-213ENST00000599543 NSUN3Q9H649 340 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms