RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 LIMCH1Q9UPQ0 1083 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 CHD9Q3L8U1 2897 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 MICAL3Q7RTP6 2002 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 WDR64B1ANS9 1081 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 CHMP2AO43633 222 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 HBP1O60381 514 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 JAK2O60674 1132 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 CHRNA1P02708 482 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 FOSBP53539 338 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 LETM2Q2VYF4 491 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 TMCO2Q7Z6W1 182 aaPredicted RBP25.55■■□□□ 1.68
CCDC9-204ENST00000599398 OXER1Q8TDS5 423 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 ATP8B4Q8TF62 1192 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 SLC5A5Q92911 643 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 OSBPL7Q9BZF2 842 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 BRMS1Q9HCU9 246 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 GABBR1Q9UBS5 961 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 WDR81Q562E7 1941 aa25.55■■□□□ 1.68
CCDC9-204ENST00000599398 CYP3A7-CYP3A51PA0A087WV96 503 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 TLL1O43897 1013 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 CA3P07451 260 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 CYP3A7P24462 503 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 MOXD1Q6UVY6 613 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 PIK3AP1Q6ZUJ8 805 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 PRDM12Q9H4Q4 367 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 DISC1Q9NRI5 854 aa25.54■■□□□ 1.68
CCDC9-204ENST00000599398 DDX25Q9UHL0 483 aaKnown RBP25.54■■□□□ 1.68
CCDC9-204ENST00000599398 RPLP2P05387 115 aaKnown RBP25.53■■□□□ 1.68
CCDC9-204ENST00000599398 GHRP10912 638 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 KRT2P35908 639 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 MTHFD1LQ6UB35 978 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 NEK8Q86SG6 692 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 CCDC83Q8IWF9 413 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 KIF2CQ99661 725 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 PCDHA2Q9Y5H9 948 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 MAFBQ9Y5Q3 323 aaPredicted RBP25.53■■□□□ 1.68
CCDC9-204ENST00000599398 CDY2AQ9Y6F7 541 aa25.53■■□□□ 1.68
CCDC9-204ENST00000599398 SIP14410 1827 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 ATP4AP20648 1035 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 KLRC1P26715 233 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 MRPS6P82932 125 aaKnown RBP25.52■■□□□ 1.68
CCDC9-204ENST00000599398 ST3GAL1Q11201 340 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 TRIM29Q14134 588 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 ZNF484Q5JVG2 852 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 FAM117BQ6P1L5 589 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.52■■□□□ 1.68
CCDC9-204ENST00000599398 MBOAT7Q96N66 472 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 GAS2L1Q99501 681 aaPredicted RBP25.52■■□□□ 1.68
CCDC9-204ENST00000599398 IFIH1Q9BYX4 1025 aaKnown RBP25.52■■□□□ 1.68
CCDC9-204ENST00000599398 UNC45AQ9H3U1 944 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 EVPLQ92817 2033 aa25.52■■□□□ 1.68
CCDC9-204ENST00000599398 M0QZ92 97 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 PSMD10O75832 226 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 AMHP03971 560 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 SFNP31947 248 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 JAK3P52333 1124 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 MGAT3Q09327 533 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 TMEM62Q0P6H9 643 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 NR5A1Q13285 461 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 IER5Q5VY09 327 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 MYOCDQ8IZQ8 938 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 MAFAQ8NHW3 353 aaPredicted RBP25.51■■□□□ 1.67
CCDC9-204ENST00000599398 BBXQ8WY36 941 aaPredicted RBP25.51■■□□□ 1.67
CCDC9-204ENST00000599398 APBB2Q92870 758 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 COL1A2P08123 1366 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 CHD7Q9P2D1 2997 aa25.51■■□□□ 1.67
CCDC9-204ENST00000599398 SMIM35A0A1B0GVV1 85 aa25.5■■□□□ 1.67
CCDC9-204ENST00000599398 SLC37A4O43826 429 aa25.5■■□□□ 1.67
CCDC9-204ENST00000599398 CCNT1O60563 726 aaKnown RBP25.5■■□□□ 1.67
CCDC9-204ENST00000599398 RBM25P49756 843 aaKnown RBP25.5■■□□□ 1.67
CCDC9-204ENST00000599398 MIER3Q7Z3K6 550 aa25.5■■□□□ 1.67
CCDC9-204ENST00000599398 ETNPPLQ8TBG4 499 aa25.5■■□□□ 1.67
CCDC9-204ENST00000599398 UPF2Q9HAU5 1272 aaKnown RBP25.5■■□□□ 1.67
CCDC9-204ENST00000599398 IGSF9BQ9UPX0 1349 aa25.5■■□□□ 1.67
CCDC9-204ENST00000599398 LOXHD1Q8IVV2 1947 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 EYSQ5T1H1 3165 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 GJB5O95377 273 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 GCFC2P16383 781 aaKnown RBP25.49■■□□□ 1.67
CCDC9-204ENST00000599398 LPIN1Q14693 890 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 SLC17A8Q8NDX2 589 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 FAM167AQ96KS9 214 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 ZSCAN31Q96LW9 406 aaPredicted RBP25.49■■□□□ 1.67
CCDC9-204ENST00000599398 NAP1L4Q99733 375 aaKnown RBP25.49■■□□□ 1.67
CCDC9-204ENST00000599398 TRPV2Q9Y5S1 764 aa25.49■■□□□ 1.67
CCDC9-204ENST00000599398 MARCH6O60337 910 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 MMP1P03956 469 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 EARS2Q5JPH6 523 aaKnown RBP25.48■■□□□ 1.67
CCDC9-204ENST00000599398 FBXO47Q5MNV8 452 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 KRT40Q6A162 431 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 PPP4R3AQ6IN85 833 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 CERS4Q9HA82 394 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 CEP131Q9UPN4 1083 aa25.48■■□□□ 1.67
CCDC9-204ENST00000599398 FAM205CA6NFA0 338 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 ZBTB42B2RXF5 422 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 PRKCEQ02156 737 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 MKRN4PQ13434 485 aaPredicted RBP25.47■■□□□ 1.67
CCDC9-204ENST00000599398 UGCGQ16739 394 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 TSHZ1Q6ZSZ6 1077 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 NME8Q8N427 588 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 RDM1Q8NG50 284 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms