RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 INF2Q27J81 1249 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 C8orf34Q49A92 452 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 PPP2R2DQ66LE6 453 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 RPAINQ86UA6 219 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 NME8Q8N427 588 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 FAM184AQ8NB25 1140 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 PCYT2Q99447 389 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 DISC1Q9NRI5 854 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 GABBR1Q9UBS5 961 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 COL1A2P08123 1366 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 KAT6AQ92794 2004 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 MBLAC1A4D2B0 266 aaPredicted RBP15.96■□□□□ 0.15
LIG1-218ENST00000599322 MSH4O15457 936 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 CHMP2AO43633 222 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 TLL1O43897 1013 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIG1-218ENST00000599322 ADAM17P78536 824 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 HMGN5P82970 282 aaKnown RBP15.96■□□□□ 0.15
LIG1-218ENST00000599322 RABEP1Q15276 862 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 FAM26DQ5JW98 314 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 ODR4Q5SWX8 454 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 PIK3AP1Q6ZUJ8 805 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 MIER3Q7Z3K6 550 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 HERC6Q8IVU3 1022 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 DBF4BQ8NFT6 615 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 TET1Q8NFU7 2136 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 RDM1Q8NG50 284 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 DNAJB3Q8WWF6 145 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 BBXQ8WY36 941 aaPredicted RBP15.96■□□□□ 0.15
LIG1-218ENST00000599322 SLC5A5Q92911 643 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 WNT8BQ93098 351 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 VWCEQ96DN2 955 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 LLPHQ9BRT6 129 aaKnown RBP15.96■□□□□ 0.15
LIG1-218ENST00000599322 FAM49AQ9H0Q0 323 aaPredicted RBP15.96■□□□□ 0.15
LIG1-218ENST00000599322 NKX2-4Q9H2Z4 354 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 KIF3AQ9Y496 699 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 PCDHA2Q9Y5H9 948 aa15.96■□□□□ 0.15
LIG1-218ENST00000599322 ADAMTS3O15072 1205 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 CCNT1O60563 726 aaKnown RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 CTDNEP1O95476 244 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 KLRC1P26715 233 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 TMOD1P28289 359 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 RABGGTBP53611 331 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 WDR5P61964 334 aaKnown RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 PPP4R3AQ6IN85 833 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 TRMT1LQ7Z2T5 733 aaKnown RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 CCDC60Q8IWA6 550 aaPredicted RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 FAM20AQ96MK3 541 aa15.95■□□□□ 0.14
LIG1-218ENST00000599322 IFIH1Q9BYX4 1025 aaKnown RBP15.95■□□□□ 0.14
LIG1-218ENST00000599322 SMIM35A0A1B0GVV1 85 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 M0R2N6 131 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 MAGEB2O15479 319 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 TDP2O95551 362 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
LIG1-218ENST00000599322 MRPS6P82932 125 aaKnown RBP15.94■□□□□ 0.14
LIG1-218ENST00000599322 PLEKHG4Q58EX7 1191 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 MTHFD1LQ6UB35 978 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 RUFY4Q6ZNE9 571 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
LIG1-218ENST00000599322 CCDC83Q8IWF9 413 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 PRDM12Q9H4Q4 367 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 PRDM6Q9NQX0 595 aa15.94■□□□□ 0.14
LIG1-218ENST00000599322 MAFBQ9Y5Q3 323 aaPredicted RBP15.94■□□□□ 0.14
LIG1-218ENST00000599322 LARGE1O95461 756 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 MMP1P03956 469 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 ADGRE1Q14246 886 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 MARCH8Q5T0T0 291 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 TRAF7Q6Q0C0 670 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 SLFN12Q8IYM2 578 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 METTL13Q8N6R0 699 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 LENG9Q96B70 501 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 C8orf76Q96K31 380 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 RAD9AQ99638 391 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
LIG1-218ENST00000599322 YBX2Q9Y2T7 364 aaKnown RBP15.93■□□□□ 0.14
LIG1-218ENST00000599322 TRPV2Q9Y5S1 764 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 CDY2AQ9Y6F7 541 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 SQORQ9Y6N5 450 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 MUC3AQ02505 3323 aa15.93■□□□□ 0.14
LIG1-218ENST00000599322 TBX3O15119 743 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 JAK2O60674 1132 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 PSMD10O75832 226 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 GHRP10912 638 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 FDPSP14324 419 aaKnown RBP15.92■□□□□ 0.14
LIG1-218ENST00000599322 FOSBP53539 338 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 MBTPS1Q14703 1052 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 GPNMBQ14956 572 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 NPY5RQ15761 445 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 KRT40Q6A162 431 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 DIS3L2Q8IYB7 885 aaKnown RBP15.92■□□□□ 0.14
LIG1-218ENST00000599322 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 MBOAT7Q96N66 472 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 MAP7D2Q96T17 732 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 FTHL17Q9BXU8 183 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms