RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 THEGQ9P2T0 379 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 TPCN1Q9ULQ1 816 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 CDY2AQ9Y6F7 541 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 IGKV6D-21A0A0A0MT36 114 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 RRN3P2A6NIE6 340 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 AMHP03971 560 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 SCRN1Q12765 414 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 MCTP2Q6DN12 878 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 SWSAP1Q6NVH7 229 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 GDPD5Q8WTR4 605 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 SH3GLB2Q9NR46 395 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 MTCH2Q9Y6C9 303 aa15.61■□□□□ 0.09
SCAF1-203ENST00000598359 XIRP2A4UGR9 3374 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 MICAL3Q7RTP6 2002 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 KAT6AQ92794 2004 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 LINC01553A4QN01 128 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 DEXIO95424 95 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 SEC24BO95487 1268 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 ATP4AP20648 1035 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 CIITAP33076 1130 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 MRPS5P82675 430 aaKnown RBP15.6■□□□□ 0.09
SCAF1-203ENST00000598359 MRPS6P82932 125 aaKnown RBP15.6■□□□□ 0.09
SCAF1-203ENST00000598359 SETQ01105 290 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-203ENST00000598359 GRB10Q13322 594 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 NPY5RQ15761 445 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 FBXO47Q5MNV8 452 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 FAM160B1Q5W0V3 765 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 MIS18BP1Q6P0N0 1132 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 PDXDC2PQ6P474 469 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 RPAINQ86UA6 219 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 RSPH3Q86UC2 560 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 TBCKQ8TEA7 893 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 ZNF302Q9NR11 478 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 GJB4Q9NTQ9 266 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 PCDHA4Q9UN74 947 aa15.6■□□□□ 0.09
SCAF1-203ENST00000598359 COL4A4P53420 1690 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-203ENST00000598359 MSH4O15457 936 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 AK2P54819 239 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
SCAF1-203ENST00000598359 MTHFD1LQ6UB35 978 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 CKAP2LQ8IYA6 745 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 BLIDQ8IZY5 108 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 NECAB1Q8N987 351 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 IL27Q8NEV9 243 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 ATP8B4Q8TF62 1192 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 C17orf80Q9BSJ5 609 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 C1QTNF1Q9BXJ1 281 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 SLKQ9H2G2 1235 aaPredicted RBP15.59■□□□□ 0.09
SCAF1-203ENST00000598359 AGO3Q9H9G7 860 aaKnown RBP15.59■□□□□ 0.09
SCAF1-203ENST00000598359 TBC1D22BQ9NU19 505 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 PCDHA2Q9Y5H9 948 aa15.59■□□□□ 0.09
SCAF1-203ENST00000598359 ZBTB42B2RXF5 422 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 M0R2N6 131 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 CHMP2AO43633 222 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 LPXNO60711 386 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 PFKFB2O60825 505 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 LARGE1O95461 756 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 CTDNEP1O95476 244 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 TDP2O95551 362 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 KLRC1P26715 233 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 CD52P31358 61 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 HTRA4P83105 476 aaPredicted RBP15.58■□□□□ 0.08
SCAF1-203ENST00000598359 ZNF746Q6NUN9 644 aaPredicted RBP15.58■□□□□ 0.08
SCAF1-203ENST00000598359 APBB2Q92870 758 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 TOP1MTQ969P6 601 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 TGS1Q96RS0 853 aaKnown RBP15.58■□□□□ 0.08
SCAF1-203ENST00000598359 PPP1R16BQ96T49 567 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 GABBR1Q9UBS5 961 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 TCEAL9Q9UHQ7 104 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 SAMM50Q9Y512 469 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 INSL6Q9Y581 213 aa15.58■□□□□ 0.08
SCAF1-203ENST00000598359 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
SCAF1-203ENST00000598359 HBP1O60381 514 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 SLC26A2P50443 739 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 ANAPC15P60006 121 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 ERVK-21P61565 698 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 KRT76Q01546 638 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 SKIV2LQ15477 1246 aaKnown RBP15.57■□□□□ 0.08
SCAF1-203ENST00000598359 TSHZ1Q6ZSZ6 1077 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 YME1L1Q96TA2 773 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 UNC45AQ9H3U1 944 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 SUGCTQ9HAC7 445 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 CDHR5Q9HBB8 845 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 GINS2Q9Y248 185 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 PCDHA10Q9Y5I2 948 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 TRPV2Q9Y5S1 764 aa15.57■□□□□ 0.08
SCAF1-203ENST00000598359 PRRC2BQ5JSZ5 2229 aaKnown RBP15.56■□□□□ 0.08
SCAF1-203ENST00000598359 SMIM35A0A1B0GVV1 85 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 ENPP3O14638 875 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 GAS7O60861 476 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 PSAPP07602 524 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 ANP32AP39687 249 aaKnown RBP15.56■□□□□ 0.08
SCAF1-203ENST00000598359 USP11P51784 963 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 UGCGQ16739 394 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 INF2Q27J81 1249 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 TMEM266Q2M3C6 531 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 IER5Q5VY09 327 aa15.56■□□□□ 0.08
SCAF1-203ENST00000598359 SMAP1Q8IYB5 467 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms