RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
ZNF558-205ENST00000597304 PPFIA2O75334 1257 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 ACTN1P12814 892 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 GBP2P32456 591 aaPredicted RBP13.72□□□□□ -0.21
ZNF558-205ENST00000597304 ADAM9Q13443 819 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 SF3B3Q15393 1217 aaKnown RBP13.72□□□□□ -0.21
ZNF558-205ENST00000597304 KCTD19Q17RG1 926 aaPredicted RBP13.72□□□□□ -0.21
ZNF558-205ENST00000597304 DNAAF5Q86Y56 855 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 CCDC65Q8IXS2 484 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 RAB17Q9H0T7 212 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 BAIAP2L1Q9UHR4 511 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 ATP8B3O60423 1300 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 CAND2O75155 1236 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 GSTA1P08263 222 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 MMEP08473 750 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 RASA1P20936 1047 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 ECM1Q16610 540 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 SPTY2D1Q68D10 685 aaPredicted RBP13.72□□□□□ -0.21
ZNF558-205ENST00000597304 TLDC1Q6P9B6 456 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 SLFN11Q7Z7L1 901 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 DAAM2Q86T65 1068 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
ZNF558-205ENST00000597304 CUL5Q93034 780 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 LRRC4CQ9HCJ2 640 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■■□ 22.3
ZNF558-205ENST00000597304 STXBP5LQ9Y2K9 1186 aa13.72□□□□□ -0.21
ZNF558-205ENST00000597304 CETN3O15182 167 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 UCHL3P15374 230 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 CHN1P15882 459 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 ITIH4Q14624 930 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 VPS36Q86VN1 386 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 CCDC63Q8NA47 563 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
ZNF558-205ENST00000597304 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 SELENOSQ9BQE4 189 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 TRIM51Q9BSJ1 452 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 KCTD10Q9H3F6 313 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.21
ZNF558-205ENST00000597304 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.22
ZNF558-205ENST00000597304 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 ASAP2O43150 1006 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 H2AFZP0C0S5 128 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 SLC9A1P19634 815 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 SMARCA1P28370 1054 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 ADCY7P51828 1080 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 H2AFVQ71UI9 128 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 NT5DC3Q86UY8 548 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.22
ZNF558-205ENST00000597304 ZNF713Q8N859 430 aaPredicted RBP13.71□□□□□ -0.22
ZNF558-205ENST00000597304 TBC1D31Q96DN5 1066 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 RSRC1Q96IZ7 334 aaKnown RBP13.71□□□□□ -0.22
ZNF558-205ENST00000597304 ZNF317Q96PQ6 595 aaPredicted RBP13.71□□□□□ -0.22
ZNF558-205ENST00000597304 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.22
ZNF558-205ENST00000597304 DOT1LQ8TEK3 1739 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
ZNF558-205ENST00000597304 ANXA13P27216 316 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 PRKCIP41743 596 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 EDRF1Q3B7T1 1238 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
ZNF558-205ENST00000597304 ATP8B4Q8TF62 1192 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 SCFD1Q8WVM8 642 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 TXLNGYQ9BZA5 131 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 SAMD15Q9P1V8 674 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 KDM3AQ9Y4C1 1321 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 RPSAP08865 295 aaKnown RBP13.7□□□□□ -0.22
ZNF558-205ENST00000597304 NR2F2P24468 414 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 EYA3Q99504 573 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 NT5C3AQ9H0P0 336 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
ZNF558-205ENST00000597304 FGGP02679 453 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 AFPP02771 609 aaKnown RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 NUDT17P0C025 328 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 TNNI2P48788 182 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 POU5F1Q01860 360 aaKnown RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 RBM46Q8TBY0 533 aaKnown RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 NEK9Q8TD19 979 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 UBA5Q9GZZ9 404 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 INTUQ9ULD6 942 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 FRMD3A2A2Y4 597 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 EDIL3O43854 480 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 MARCH6O60337 910 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 SHBGP04278 402 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 MMP13P45452 471 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 NPEPPSP55786 919 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms