RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SMCO2A6NFE2 343 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 DDX39AO00148 427 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 DCXO43602 365 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 MMP1P03956 469 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 GTF2F1P35269 517 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 LTBRP36941 435 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 ADCY7P51828 1080 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 ZP2Q05996 745 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 DLX2Q07687 328 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 HYAL1Q12794 435 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 NFX1Q12986 1120 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 PAK2Q13177 524 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 COL19A1Q14993 1142 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 NPAS4Q8IUM7 802 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 ADHFE1Q8IWW8 467 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 CMTR2Q8IYT2 770 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 LINC01599Q8WXQ3 324 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 PPP2R3CQ969Q6 453 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 NEK1Q96PY6 1258 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 ANO3Q9BYT9 981 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 RIC8AQ9NPQ8 531 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 GINS2Q9Y248 185 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 CNTNAP5Q8WYK1 1306 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
CHMP2A-202ENST00000596708 SMIM35A0A1B0GVV1 85 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 BACH1O14867 736 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 ZBTB43O43298 467 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 MBTPS2O43462 519 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 SCG2P13521 617 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 KLRC1P26715 233 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 NDUFV1P49821 464 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 KRT76Q01546 638 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 RTN1Q16799 776 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 CTC1Q2NKJ3 1217 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 CEP55Q53EZ4 464 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 NAALADL2Q58DX5 795 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 FAM160B1Q5W0V3 765 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 APOA5Q6Q788 366 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 NME8Q8N427 588 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 P2RX5Q93086 422 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 TCEANC2Q96MN5 208 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 TMEM260Q9NX78 707 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 NAP1L2Q9ULW6 460 aaPredicted RBP12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 IGSF9BQ9UPX0 1349 aa12.04□□□□□ -0.48
CHMP2A-202ENST00000596708 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 LINC01565O15544 149 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 HBP1O60381 514 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 ATG7O95352 703 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 ITGB1P05556 798 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 IRS1P35568 1242 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 ITGB3BPQ13352 177 aaPredicted RBP12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 ADAM15Q13444 863 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 KLHL23Q8NBE8 558 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 SPPL3Q8TCT6 385 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 POF1BQ8WVV4 589 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 CD207Q9UJ71 328 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 PCDHB7Q9Y5E2 793 aa12.03□□□□□ -0.48
CHMP2A-202ENST00000596708 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 STXBP3O00186 592 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 MEIS1O00470 390 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 TBX10O75333 385 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 RPS6KA5O75582 802 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 DNAJB1P25685 340 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 GATMP50440 423 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 SLC26A2P50443 739 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 AP3B2Q13367 1082 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 SMAD4Q13485 552 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 CAMK1Q14012 370 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 JAKMIP3Q5VZ66 844 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 MIS18BP1Q6P0N0 1132 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 PDXDC2PQ6P474 469 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 ABHD15Q6UXT9 468 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 DHX32Q7L7V1 743 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 TRMT1LQ7Z2T5 733 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 RBM23Q86U06 439 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 PLA2G4DQ86XP0 818 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 MICAL1Q8TDZ2 1067 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 POP1Q99575 1024 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms