RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 HMGB1P1B2RPK0 211 aaPredicted RBP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 GPR25O00155 361 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 ZMYND10O75800 440 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 ERLIN2O94905 339 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 FSBPO95073 299 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 BAG3O95817 575 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 FCER1AP12319 257 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 HSPA9P38646 679 aaKnown RBP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 CCT5P48643 541 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 RBM5P52756 815 aaKnown RBP eCLIP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 DRP2Q13474 957 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 TMEM266Q2M3C6 531 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 ZCWPW2Q504Y3 356 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 TTMPQ5BVD1 217 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 HYIQ5T013 277 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 MEI1Q5TIA1 1274 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 SFMBT2Q5VUG0 894 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 MCTP2Q6DN12 878 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 RRAGAQ7L523 313 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 ARMC9Q7Z3E5 817 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 CNPY4Q8N129 248 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 ARFGAP2Q8N6H7 521 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 TSEN2Q8NCE0 465 aaKnown RBP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 RASGRP4Q8TDF6 673 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 HDAC7Q8WUI4 952 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 RAD54LQ92698 747 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 RRP36Q96EU6 259 aaKnown RBP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 NAP1L4Q99733 375 aaKnown RBP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 EPN3Q9H201 632 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 MMRN2Q9H8L6 949 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 VEZTQ9HBM0 779 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 A1CFQ9NQ94 594 aaKnown RBP9.43□□□□□ -0.9
SIN3B-208ENST00000596638 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 AIPL1Q9NZN9 384 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 TMEM59LQ9UK28 342 aa9.43□□□□□ -0.9
SIN3B-208ENST00000596638 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 KLRF2D3W0D1 207 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 IGF2BP3O00425 579 aaKnown RBP eCLIP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 PLEKP08567 350 aaPredicted RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 INPP5BP32019 993 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 CRKP46108 304 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 CACNB3P54284 484 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 NAPAP54920 295 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 TNNC1P63316 161 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 FKBP3Q00688 224 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 CUL1Q13616 776 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 PLCB4Q15147 1175 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 APOBEC3HQ6NTF7 200 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 CACNA2D4Q7Z3S7 1137 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 TAX1BP1Q86VP1 789 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 GSPT2Q8IYD1 628 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 SMCR8Q8TEV9 937 aaPredicted RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 LARP4BQ92615 738 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 ARL8AQ96BM9 186 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 MTMR8Q96EF0 704 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 PBKQ96KB5 322 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 INPP4AQ96PE3 977 aaPredicted RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 ZIM3Q96PE6 472 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 RIOX1Q9H6W3 641 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 MKNK2Q9HBH9 465 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 RBM12Q9NTZ6 932 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 GEMIN8Q9NWZ8 242 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 COL4A3BPQ9Y5P4 624 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 BZW2Q9Y6E2 419 aaKnown RBP9.42□□□□□ -0.9
SIN3B-208ENST00000596638 PAPPA2Q9BXP8 1791 aa9.42□□□□□ -0.9
SIN3B-208ENST00000596638 NAV1Q8NEY1 1877 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 EPHB6O15197 1021 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 MEFVO15553 781 aaPredicted RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 CCNT1O60563 726 aaKnown RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 RASA1P20936 1047 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 NF2P35240 595 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 TECP42680 631 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 FNTAP49354 379 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 SOX10P56693 466 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 SLC18A3Q16572 532 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 LETM2Q2VYF4 491 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 KRT79Q5XKE5 535 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 DZIP1Q86YF9 867 aaKnown RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 PRPF38AQ8NAV1 312 aaKnown RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 PIK3R5Q8WYR1 880 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms