RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 PDE6BP35913 854 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 SEC24CP53992 1094 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 KLRC3Q07444 240 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 ADAM9Q13443 819 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 GLE1Q53GS7 698 aaKnown RBP16.8■□□□□ 0.28
ZNF541-205ENST00000595558 POTEGQ6S5H5 508 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 TMX4Q9H1E5 349 aaPredicted RBP16.8■□□□□ 0.28
ZNF541-205ENST00000595558 GANQ9H2C0 597 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 CPP00450 1065 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 PLA2G4BP0C869 781 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
ZNF541-205ENST00000595558 CYP4A11Q02928 519 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 ICE2Q659A1 982 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 GPBP1Q86WP2 473 aa16.8■□□□□ 0.28
ZNF541-205ENST00000595558 ZBTB39O15060 712 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ERLIN2O94905 339 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ERVK-9P63128 1117 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ICA1Q05084 483 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 KCNH2Q12809 1159 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 PAK2Q13177 524 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ARSHQ5FYA8 562 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 MIGA2Q7L4E1 593 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ZNF571Q7Z3V5 609 aaPredicted RBP16.79■□□□□ 0.28
ZNF541-205ENST00000595558 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ACER1Q8TDN7 264 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 ZDHHC15Q96MV8 337 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 AP1M1Q9BXS5 423 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 LTBP1Q14766 1721 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 MYH7BA7E2Y1 1941 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 MEIS2O14770 477 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 MED24O75448 989 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 POLD1P28340 1107 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 LSP1P33241 339 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 SYN2Q92777 582 aaPredicted RBP16.79■□□□□ 0.28
ZNF541-205ENST00000595558 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
ZNF541-205ENST00000595558 AJAP1Q9UKB5 411 aaPredicted RBP16.79■□□□□ 0.28
ZNF541-205ENST00000595558 NDUFB10O96000 172 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 CYP11B2P19099 503 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 ASIC2Q16515 512 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 DPY19L2P1Q6NXN4 242 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 NEUROG2Q9H2A3 272 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 CENPHQ9H3R5 247 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 FAM86B1E9PN63 330 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 H0YIN7 160 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 FAM86B2P0C5J1 330 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 ECHS1P30084 290 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 IRF2BP2Q7Z5L9 587 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 RBM46Q8TBY0 533 aaKnown RBP16.78■□□□□ 0.28
ZNF541-205ENST00000595558 AIPL1Q9NZN9 384 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 PI4KBQ9UBF8 816 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 PLAAQ9Y263 795 aa16.78■□□□□ 0.28
ZNF541-205ENST00000595558 SFI1A8K8P3 1242 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 hCG_1984214I3L0E3 225 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 HPDP32754 393 aaPredicted RBP16.77■□□□□ 0.28
ZNF541-205ENST00000595558 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
ZNF541-205ENST00000595558 CEP85LQ5SZL2 805 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 MAATS1Q7Z4T9 603 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 ZNF713Q8N859 430 aaPredicted RBP16.77■□□□□ 0.28
ZNF541-205ENST00000595558 CSRNP1Q96S65 589 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 FAM107BQ9H098 131 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 SWAP70Q9UH65 585 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 SLX4Q8IY92 1834 aa16.77■□□□□ 0.28
ZNF541-205ENST00000595558 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 NR1D1P20393 614 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 NR2F2P24468 414 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 FLT3P36888 993 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.27
ZNF541-205ENST00000595558 DGKZQ13574 1117 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 HLTFQ14527 1009 aaKnown RBP eCLIP16.77■□□□□ 0.27
ZNF541-205ENST00000595558 GJB7Q6PEY0 223 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 KDM7AQ6ZMT4 941 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 TRMT1LQ7Z2T5 733 aaKnown RBP16.77■□□□□ 0.27
ZNF541-205ENST00000595558 CEP63Q96MT8 703 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 RNF14Q9UBS8 474 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 TMEM59LQ9UK28 342 aa16.77■□□□□ 0.27
ZNF541-205ENST00000595558 CEP104O60308 925 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 INPP5BP32019 993 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 HOXD13P35453 343 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 EPS15P42566 896 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 ABCB5Q2M3G0 1257 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 ANO3Q9BYT9 981 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 GLIS2Q9BZE0 524 aaPredicted RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 LRRC27Q9C0I9 530 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 LRRC4CQ9HCJ2 640 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 BMP2KQ9NSY1 1161 aaPredicted RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 OPLAHO14841 1288 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 ITGA4P13612 1032 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 GTF2A1P52655 376 aaPredicted RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 RPS6KA1Q15418 735 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 UAP1Q16222 522 aaPredicted RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 NAA35Q5VZE5 725 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms