RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DESI2Q9BSY9 194 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 TANGO6Q9C0B7 1094 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 GOLGA6AQ9NYA3 693 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 TAB2Q9NYJ8 693 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 ABCB11O95342 1321 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 TTC36A6NLP5 189 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 PSMA7O14818 248 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 ICAM1P05362 532 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 AMPD3Q01432 767 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 SPP2Q13103 211 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 NOA1Q8NC60 698 aaKnown RBP16.89■□□□□ 0.29
PNKP-204ENST00000594661 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 EXOC1Q9NV70 894 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 CCPG1Q9ULG6 757 aa16.89■□□□□ 0.29
PNKP-204ENST00000594661 MSH4O15457 936 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
PNKP-204ENST00000594661 CLNS1AP54105 237 aaKnown RBP16.88■□□□□ 0.29
PNKP-204ENST00000594661 PMS1P54277 932 aaKnown RBP16.88■□□□□ 0.29
PNKP-204ENST00000594661 SLC8A3P57103 927 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 UBXN2AP68543 259 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 PDE4DQ08499 809 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 HYIQ5T013 277 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 HOOK2Q96ED9 719 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 SPATS2LQ9NUQ6 558 aaKnown RBP16.88■□□□□ 0.29
PNKP-204ENST00000594661 IGLV3-22A0A075B6J6 115 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 TBX3O15119 743 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 PTPRAP18433 802 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 GNGT1P63211 74 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 SKOR1P84550 965 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
PNKP-204ENST00000594661 ATP6V0A4Q9HBG4 840 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 DDX20Q9UHI6 824 aaKnown RBP16.88■□□□□ 0.29
PNKP-204ENST00000594661 ADGRG1Q9Y653 693 aa16.88■□□□□ 0.29
PNKP-204ENST00000594661 POTEB3A0JP26 581 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 POTECB2RU33 542 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 FLOT1O75955 427 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 FCER1AP12319 257 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 ZNF76P36508 570 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 USP14P54578 494 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 ACTN3Q08043 901 aaPredicted RBP16.87■□□□□ 0.29
PNKP-204ENST00000594661 STK4Q13043 487 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 POTEBQ6S5H4 581 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 MICALCLQ6ZW33 695 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 DYMQ7RTS9 669 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 CCDC26Q8TAB7 109 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 HPS3Q969F9 1004 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 TRIM47Q96LD4 638 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 WDR18Q9BV38 432 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 RPAP3Q9H6T3 665 aaPredicted RBP16.87■□□□□ 0.29
PNKP-204ENST00000594661 ITIH6Q6UXX5 1313 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 ZEB2O60315 1214 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 MFAP3LO75121 409 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 MED24O75448 989 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 CASP14P31944 242 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 RWDD2BP57060 319 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 ZC3H12AQ5D1E8 599 aaKnown RBP16.87■□□□□ 0.29
PNKP-204ENST00000594661 MAB21L3Q8N8X9 362 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 SLC38A10Q9HBR0 1119 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 KIAA1024Q9UPX6 916 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 SAMM50Q9Y512 469 aa16.87■□□□□ 0.29
PNKP-204ENST00000594661 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 TARSL2A2RTX5 802 aaKnown RBP16.86■□□□□ 0.29
PNKP-204ENST00000594661 NFIBO00712 420 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 GYPCP04921 128 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 BACE1P56817 501 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 ZNF569Q5MCW4 686 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 NCAPH2Q6IBW4 605 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 DLK2Q6UY11 383 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 IRF2BP1Q8IU81 584 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 CPXCR1Q8N123 301 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 ZNF280CQ8ND82 737 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
PNKP-204ENST00000594661 FAM20AQ96MK3 541 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 CRACR2AQ9BSW2 395 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 RAVER2Q9HCJ3 691 aaKnown RBP16.86■□□□□ 0.29
PNKP-204ENST00000594661 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 PPP1R9AQ9ULJ8 1098 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
PNKP-204ENST00000594661 PHIPQ8WWQ0 1821 aa16.86■□□□□ 0.29
PNKP-204ENST00000594661 E9PMD0 336 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.29
PNKP-204ENST00000594661 DRP2Q13474 957 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 CNGA4Q8IV77 575 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 KIAA0895Q8NCT3 520 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 DDX12PQ92771 950 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 NAPGQ99747 312 aaPredicted RBP16.85■□□□□ 0.29
PNKP-204ENST00000594661 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 NAA15Q9BXJ9 866 aaKnown RBP16.85■□□□□ 0.29
PNKP-204ENST00000594661 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 THAP9Q9H5L6 903 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 LZTFL1Q9NQ48 299 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms