RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 SEC14L1Q92503 715 aa16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 MYCBPQ99417 103 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 VCPKMTQ9H867 229 aa16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 FBXL5Q9UKA1 691 aa16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 STXBP5LQ9Y2K9 1186 aa16.24■□□□□ 0.19
SMARCA4-219ENST00000592604 A0A0A6YYK5 440 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 NR2F2P24468 414 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 ZNF543Q08ER8 600 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 MTMR3Q13615 1198 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 ARSHQ5FYA8 562 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 BARGINQ6ZT62 677 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 ADGRF4Q8IZF3 695 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 LRRC47Q8N1G4 583 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 CYFIP2Q96F07 1278 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 SPAG5Q96R06 1193 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 NEUROG2Q9H2A3 272 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 SLITRK6Q9H5Y7 841 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 GPCPD1Q9NPB8 672 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 A1CFQ9NQ94 594 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 SPATA31A5Q5VU36 1347 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 SPATA31A7Q8IWB4 1347 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 FOCADQ5VW36 1801 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 GMNCA6NCL1 334 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 GAKO14976 1311 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 AFPP02771 609 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 PON1P27169 355 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 CTNNA1P35221 906 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 CCDC91Q7Z6B0 441 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 DDX42Q86XP3 938 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 LMBR1Q8WVP7 490 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 SUCLA2Q9P2R7 463 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 NOC2LQ9Y3T9 749 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 CEP83Q9Y592 693 aa16.23■□□□□ 0.19
SMARCA4-219ENST00000592604 TRAPPC3O43617 180 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 FLOT1O75955 427 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 HPDP32754 393 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 SLC12A3P55017 1021 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 GABPAQ06546 454 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 GOLPH3Q9H4A6 298 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 ARMCX3Q9UH62 379 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 INTUQ9ULD6 942 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 POTECB2RU33 542 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 PAEPP09466 180 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 IL1R1P14778 569 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 SMTNP53814 917 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 NPEPPSP55786 919 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 IFT88Q13099 833 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 EXOC3L4Q17RC7 722 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 OR2W6PQ8NHA6 318 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 DHX36Q9H2U1 1008 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 KCNMB3Q9NPA1 279 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 DDX47Q9H0S4 455 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 PSTPIP2Q9H939 334 aa16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 PPANQ9NQ55 473 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-219ENST00000592604 KRIT1O00522 736 aa16.21■□□□□ 0.19
SMARCA4-219ENST00000592604 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
SMARCA4-219ENST00000592604 RNF187Q5TA31 235 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-219ENST00000592604 EPM2AIP1Q7L775 607 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-219ENST00000592604 C10orf71Q711Q0 1435 aa16.21■□□□□ 0.19
SMARCA4-219ENST00000592604 C5orf60A6NFR6 353 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 ZBTB5O15062 677 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 AKR1B1P15121 316 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 CASP5P51878 434 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 JAM2P57087 298 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 PPP2R2AP63151 447 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 EPHA7Q15375 998 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 PEX26Q7Z412 305 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 SYCE1Q8N0S2 351 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 CEP120Q8N960 986 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 CCDC26Q8TAB7 109 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 MBOAT7Q96N66 472 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 MXD3Q9BW11 206 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 CENPHQ9H3R5 247 aa16.21■□□□□ 0.18
SMARCA4-219ENST00000592604 CYP3A7-CYP3A51PA0A087WV96 503 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 PDXKO00764 312 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 MED24O75448 989 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 RASSF9O75901 435 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 TTLL1O95922 423 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 H2AFZP0C0S5 128 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 CYP3A7P24462 503 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 FLT3P36888 993 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 SETQ01105 290 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 H2AFVQ71UI9 128 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 NT5DC3Q86UY8 548 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 RNF217Q8TC41 542 aa16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 ACTR5Q9H9F9 607 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 DDX20Q9UHI6 824 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-219ENST00000592604 TTC7AQ9ULT0 858 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms