RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 SREBF1P36956 1147 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 ACTR2P61160 394 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 SETQ01105 290 aaPredicted RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 EXOSC10Q01780 885 aaKnown RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 AKAP17AQ02040 695 aaKnown RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 LPIN1Q14693 890 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 FBXO47Q5MNV8 452 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 ODR4Q5SWX8 454 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 FAM43BQ6ZT52 329 aaPredicted RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 NIPA1Q7RTP0 329 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 PLPPR4Q7Z2D5 763 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 DNAJB3Q8WWF6 145 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 TCEANC2Q96MN5 208 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 NECAB3Q96P71 396 aaPredicted RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 C11orf84Q9BUA3 381 aaPredicted RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 FTHL17Q9BXU8 183 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 FAM49AQ9H0Q0 323 aaPredicted RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 LMAN2LQ9H0V9 348 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 FAM50BQ9Y247 325 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 TELO2Q9Y4R8 837 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 SQORQ9Y6N5 450 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
VMP1-214ENST00000592106 EYSQ5T1H1 3165 aa11.55□□□□□ -0.56
VMP1-214ENST00000592106 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
VMP1-214ENST00000592106 BACH1O14867 736 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 STAG3L1P0CL83 205 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 INSRRP14616 1297 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 STAT5BP51692 787 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 PAK2Q13177 524 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 LEXMQ3ZCV2 418 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 NME8Q8N427 588 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 BANK1Q8NDB2 785 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 CCDC148Q8NFR7 591 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 NSUN3Q9H649 340 aaKnown RBP11.54□□□□□ -0.56
VMP1-214ENST00000592106 AGO4Q9HCK5 861 aaKnown RBP11.54□□□□□ -0.56
VMP1-214ENST00000592106 C6orf50Q9HD87 102 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 BRPF3Q9ULD4 1205 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 PCDHA2Q9Y5H9 948 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 NLRC5Q86WI3 1866 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 COL1A2P08123 1366 aa11.54□□□□□ -0.56
VMP1-214ENST00000592106 SMIM35A0A1B0GVV1 85 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 C5orf67F2Z3F1 127 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 NCK2O43639 380 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 HBP1O60381 514 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 SCG2P13521 617 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 KCNA5P22460 613 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 GNA11P29992 359 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
VMP1-214ENST00000592106 FUT2Q10981 343 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
VMP1-214ENST00000592106 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
VMP1-214ENST00000592106 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 PFKFB3Q16875 520 aaPredicted RBP11.53□□□□□ -0.56
VMP1-214ENST00000592106 ADCK5Q3MIX3 580 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 MARCH8Q5T0T0 291 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 MIS18BP1Q6P0N0 1132 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 PLA2G4DQ86XP0 818 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 NPAS4Q8IUM7 802 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 REXO1Q8N1G1 1221 aaKnown RBP11.53□□□□□ -0.56
VMP1-214ENST00000592106 BICD2Q8TD16 824 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 PPP2R3CQ969Q6 453 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 PCYT2Q99447 389 aa11.53□□□□□ -0.56
VMP1-214ENST00000592106 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.52□□□□□ -0.57
VMP1-214ENST00000592106 DDX39AO00148 427 aaKnown RBP11.52□□□□□ -0.57
VMP1-214ENST00000592106 MEIS1O00470 390 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 ENPP3O14638 875 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 REC8O95072 547 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 ARP10275 920 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 PSMA5P28066 241 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 CDC27P30260 824 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 CD52P31358 61 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 JAKMIP3Q5VZ66 844 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 CMTR2Q8IYT2 770 aaKnown RBP11.52□□□□□ -0.57
VMP1-214ENST00000592106 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 JAKMIP1Q96N16 626 aaKnown RBP11.52□□□□□ -0.57
VMP1-214ENST00000592106 PLVAPQ9BX97 442 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 CELF4Q9BZC1 486 aaKnown RBP11.52□□□□□ -0.57
VMP1-214ENST00000592106 OSBPL7Q9BZF2 842 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 TBC1D22BQ9NU19 505 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 TMEM260Q9NX78 707 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 LRFN2Q9ULH4 789 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 IGSF9BQ9UPX0 1349 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 NID2Q14112 1375 aa11.52□□□□□ -0.57
VMP1-214ENST00000592106 PRUNE2Q8WUY3 3088 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 ATG7O95352 703 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 CYP3A4P08684 503 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 BMPR1AP36894 532 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 KRT76Q01546 638 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms