RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 LLPHQ9BRT6 129 aaKnown RBP15.76■□□□□ 0.11
CLIP3-205ENST00000592017 BACH2Q9BYV9 841 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 TBC1D22BQ9NU19 505 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 TRPC6Q9Y210 931 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 MBLAC1A4D2B0 266 aaPredicted RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 FAM205CA6NFA0 338 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 DHX15O43143 795 aaKnown RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 CHMP2AO43633 222 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 ATG7O95352 703 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 CD2BP2O95400 341 aaKnown RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 CHRNA1P02708 482 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 MMP1P03956 469 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 INSRRP14616 1297 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 IGBP1P78318 339 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 EARS2Q5JPH6 523 aaKnown RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 MIS18BP1Q6P0N0 1132 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 DIS3L2Q8IYB7 885 aaKnown RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 PPM1EQ8WY54 764 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 GJA10Q969M2 543 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 C8orf76Q96K31 380 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 PRDM6Q9NQX0 595 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 DDX25Q9UHL0 483 aaKnown RBP15.75■□□□□ 0.11
CLIP3-205ENST00000592017 SAMM50Q9Y512 469 aa15.75■□□□□ 0.11
CLIP3-205ENST00000592017 SLC37A4O43826 429 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 GAS7O60861 476 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 EFCAB14O75071 495 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 GJB5O95377 273 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 STAT5BP51692 787 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 KRT76Q01546 638 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 PLCB4Q15147 1175 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 Q4G0T1 1027 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 LRCH2Q5VUJ6 765 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 FAM160B1Q5W0V3 765 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 FAM117BQ6P1L5 589 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 PLPPR4Q7Z2D5 763 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 CCDC60Q8IWA6 550 aaPredicted RBP15.74■□□□□ 0.11
CLIP3-205ENST00000592017 ARNTL2Q8WYA1 636 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 SEPT8Q92599 483 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 RAD9AQ99638 391 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 ZBED2Q9BTP6 218 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 TRIP12Q14669 1992 aaPredicted RBP15.74■□□□□ 0.11
CLIP3-205ENST00000592017 TANC1Q9C0D5 1861 aa15.74■□□□□ 0.11
CLIP3-205ENST00000592017 MYO9BQ13459 2157 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 IGKV6D-21A0A0A0MT36 114 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 BTBD18B2RXH4 712 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 CCNT1O60563 726 aaKnown RBP15.73■□□□□ 0.11
CLIP3-205ENST00000592017 MGAT3Q09327 533 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 SAFBQ15424 915 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLIP3-205ENST00000592017 CCDC85BQ15834 202 aaPredicted RBP15.73■□□□□ 0.11
CLIP3-205ENST00000592017 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
CLIP3-205ENST00000592017 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 TAF2Q6P1X5 1199 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 PDXDC2PQ6P474 469 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 MOXD1Q6UVY6 613 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 ABHD15Q6UXT9 468 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 CKAP2LQ8IYA6 745 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 DNAJB3Q8WWF6 145 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 SLC5A5Q92911 643 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 COL25A1Q9BXS0 654 aaPredicted RBP15.73■□□□□ 0.11
CLIP3-205ENST00000592017 ZNF302Q9NR11 478 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 TUBE1Q9UJT0 475 aa15.73■□□□□ 0.11
CLIP3-205ENST00000592017 TTC28Q96AY4 2481 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 CYP3A7-CYP3A51PA0A087WV96 503 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 RRN3P2A6NIE6 340 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 WDR64B1ANS9 1081 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 PSAPP07602 524 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 CYP3A7P24462 503 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 TRMT1LQ7Z2T5 733 aaKnown RBP15.72■□□□□ 0.11
CLIP3-205ENST00000592017 SMAP1Q8IYB5 467 aaPredicted RBP15.72■□□□□ 0.11
CLIP3-205ENST00000592017 TRAPPC12Q8WVT3 735 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 TNFRSF25Q93038 417 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 RIT2Q99578 217 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 UNC45AQ9H3U1 944 aa15.72■□□□□ 0.11
CLIP3-205ENST00000592017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
CLIP3-205ENST00000592017 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 MARCH6O60337 910 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 AMHP03971 560 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 GHRP10912 638 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 GCFC2P16383 781 aaKnown RBP15.71■□□□□ 0.11
CLIP3-205ENST00000592017 MCM2P49736 904 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 GNL2Q13823 731 aaKnown RBP15.71■□□□□ 0.11
CLIP3-205ENST00000592017 LPIN1Q14693 890 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 MYOCDQ8IZQ8 938 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 ETNPPLQ8TBG4 499 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 TNPO1Q92973 898 aaKnown RBP15.71■□□□□ 0.11
CLIP3-205ENST00000592017 MBOAT7Q96N66 472 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 NAP1L4Q99733 375 aaKnown RBP15.71■□□□□ 0.11
CLIP3-205ENST00000592017 FAM49AQ9H0Q0 323 aaPredicted RBP15.71■□□□□ 0.11
CLIP3-205ENST00000592017 DISC1Q9NRI5 854 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 GABBR1Q9UBS5 961 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 PCDHA10Q9Y5I2 948 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 MTCH2Q9Y6C9 303 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 TRANK1O15050 2925 aa15.71■□□□□ 0.11
CLIP3-205ENST00000592017 LINC01553A4QN01 128 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms