RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
VMP1-213ENST00000591877 RCAN3Q9UKA8 241 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 MYH1P12882 1939 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 MGAMO43451 1857 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 ADGRA2Q96PE1 1338 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 RBBP6Q7Z6E9 1792 aaKnown RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 H3BRJ5 948 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 DHX15O43143 795 aaKnown RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 TLR2O60603 784 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 MCM4P33991 863 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 RRP1BQ14684 758 aaKnown RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 TCEAL1Q15170 157 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 NAA16Q6N069 864 aaPredicted RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 ZNF662Q6ZS27 426 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 ANKRD23Q86SG2 305 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 SCYL3Q8IZE3 742 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 ARMC10Q8N2F6 343 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 C19orf47Q8N9M1 422 aaKnown RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 STK35Q8TDR2 534 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 WNT8BQ93098 351 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 TMX1Q9H3N1 280 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 BRMS1Q9HCU9 246 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 ZCCHC17Q9NP64 241 aaKnown RBP9.1□□□□□ -0.95
VMP1-213ENST00000591877 AATFQ9NY61 560 aaKnown RBP eCLIP9.1□□□□□ -0.95
VMP1-213ENST00000591877 ACTR10Q9NZ32 417 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 DDX19BQ9UMR2 479 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 TRIM33Q9UPN9 1127 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 PTPN22Q9Y2R2 807 aa9.1□□□□□ -0.95
VMP1-213ENST00000591877 LOC285556D6RIA3 1793 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 PDHXO00330 501 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 CXCL11O14625 94 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 CTNND1O60716 968 aaKnown RBP9.09□□□□□ -0.95
VMP1-213ENST00000591877 WNT11O96014 354 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 CTGFP29279 349 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 DYNLL1P63167 89 aaKnown RBP9.09□□□□□ -0.95
VMP1-213ENST00000591877 JAG1P78504 1218 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 DDR2Q16832 855 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 C17orf99Q6UX52 265 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 ADAMTSL4Q6UY14 1074 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
VMP1-213ENST00000591877 AACSQ86V21 672 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 DTX1Q86Y01 620 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 RPAP2Q8IXW5 612 aaPredicted RBP9.09□□□□□ -0.95
VMP1-213ENST00000591877 TEX11Q8IYF3 940 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 FAM169BQ8N8A8 192 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 ARHGAP39Q9C0H5 1083 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 LACRTQ9GZZ8 138 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 CBX8Q9HC52 389 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 IL1RAPL2Q9NP60 686 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 AFG3L2Q9Y4W6 797 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 ZHX2Q9Y6X8 837 aa9.09□□□□□ -0.95
VMP1-213ENST00000591877 A0A0G2JLL6 359 aaPredicted RBP9.08□□□□□ -0.96
VMP1-213ENST00000591877 GSTP1P09211 210 aaKnown RBP9.08□□□□□ -0.96
VMP1-213ENST00000591877 PRRT2Q7Z6L0 340 aaPredicted RBP9.08□□□□□ -0.96
VMP1-213ENST00000591877 ERC1Q8IUD2 1116 aa9.08□□□□□ -0.96
VMP1-213ENST00000591877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.08□□□□□ -0.96
VMP1-213ENST00000591877 ADGRE2Q9UHX3 823 aa9.08□□□□□ -0.96
VMP1-213ENST00000591877 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.96
VMP1-213ENST00000591877 TACC3Q9Y6A5 838 aa9.08□□□□□ -0.96
VMP1-213ENST00000591877 DDX60LQ5H9U9 1706 aaKnown RBP9.08□□□□□ -0.96
VMP1-213ENST00000591877 PDE4DIPQ5VU43 2346 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 PRR19A6NJB7 356 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 SOX1O00570 391 aaPredicted RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 BAG3O95817 575 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 CYP2C8P10632 490 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 EPHA1P21709 976 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 CYP7A1P22680 504 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 CAP2P40123 477 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 LACTBP83111 547 aaPredicted RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 CLCQ05315 142 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 SHROOM1Q2M3G4 852 aaPredicted RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 HSP90AB4PQ58FF6 505 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 GK5Q6ZS86 529 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 MAPKAPK5Q8IW41 473 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 GRIN3AQ8TCU5 1115 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 TGFBRAP1Q8WUH2 860 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 RNPC3Q96LT9 517 aaKnown RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 C7orf69Q9H7B7 122 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 DNAJC18Q9H819 358 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 SH2B1Q9NRF2 756 aaPredicted RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 CPA4Q9UI42 421 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 PTCH2Q9Y6C5 1203 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 CENPFP49454 3210 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 DOCK3Q8IZD9 2030 aa9.07□□□□□ -0.96
VMP1-213ENST00000591877 KIAA0100Q14667 2235 aaKnown RBP9.07□□□□□ -0.96
VMP1-213ENST00000591877 FLT1P17948 1338 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 MYH7P12883 1935 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 HMX2A2RU54 273 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 MEIS3P2A8K0S8 358 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 IDH1O75874 414 aaKnown RBP9.06□□□□□ -0.96
VMP1-213ENST00000591877 CYP11A1P05108 521 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 FXNQ16595 210 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 FBXW10Q5XX13 1052 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms