RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 POTEB3A0JP26 581 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 ZBTB42B2RXF5 422 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 H3BNC9 293 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 ZNF76P36508 570 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 POTEBQ6S5H4 581 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 TSHZ1Q6ZSZ6 1077 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 CCDC60Q8IWA6 550 aaPredicted RBP20.51■□□□□ 0.87
H3F3B-209ENST00000589949 MRPL38Q96DV4 380 aaKnown RBP20.51■□□□□ 0.87
H3F3B-209ENST00000589949 GLT8D2Q9H1C3 349 aa20.51■□□□□ 0.87
H3F3B-209ENST00000589949 CCDC196A0A1B0GTZ2 297 aa20.5■□□□□ 0.87
H3F3B-209ENST00000589949 GPM6BQ13491 265 aa20.5■□□□□ 0.87
H3F3B-209ENST00000589949 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
H3F3B-209ENST00000589949 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
H3F3B-209ENST00000589949 UBE2ZQ9H832 354 aaPredicted RBP20.5■□□□□ 0.87
H3F3B-209ENST00000589949 CDHR5Q9HBB8 845 aa20.5■□□□□ 0.87
H3F3B-209ENST00000589949 NLRC5Q86WI3 1866 aa20.5■□□□□ 0.87
H3F3B-209ENST00000589949 TTC3P53804 2025 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 IPO5O00410 1097 aaKnown RBP20.49■□□□□ 0.87
H3F3B-209ENST00000589949 KLRC1P26715 233 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
H3F3B-209ENST00000589949 EVCP57679 992 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 TOB2Q14106 344 aaPredicted RBP20.49■□□□□ 0.87
H3F3B-209ENST00000589949 REXO1Q8N1G1 1221 aaKnown RBP20.49■□□□□ 0.87
H3F3B-209ENST00000589949 LENG9Q96B70 501 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 ZNF689Q96CS4 500 aaPredicted RBP20.49■□□□□ 0.87
H3F3B-209ENST00000589949 SAMD11Q96NU1 681 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 TMX1Q9H3N1 280 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 TRPV2Q9Y5S1 764 aa20.49■□□□□ 0.87
H3F3B-209ENST00000589949 SMIM35A0A1B0GVV1 85 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 CCT2P78371 535 aaKnown RBP20.48■□□□□ 0.87
H3F3B-209ENST00000589949 IER5Q5VY09 327 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 SWSAP1Q6NVH7 229 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 KIAA0319LQ8IZA0 1049 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 FIBCD1Q8N539 461 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 ATP8B4Q8TF62 1192 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 KHSRPQ92945 711 aaKnown RBP eCLIP20.48■□□□□ 0.872e-30■□□□□ 8.9
H3F3B-209ENST00000589949 LARP6Q9BRS8 491 aaKnown RBP20.48■□□□□ 0.87
H3F3B-209ENST00000589949 CELF4Q9BZC1 486 aaKnown RBP20.48■□□□□ 0.87
H3F3B-209ENST00000589949 C6orf50Q9HD87 102 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 CD320Q9NPF0 282 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 RAPGEFL1Q9UHV5 662 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 PADI3Q9ULW8 664 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 LOXHD1Q8IVV2 1947 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 ADGRA3Q8IWK6 1321 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 IGSF9BQ9UPX0 1349 aa20.48■□□□□ 0.87
H3F3B-209ENST00000589949 BACH1O14867 736 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 DGKIO75912 1065 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 TMEM266Q2M3C6 531 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.47■□□□□ 0.87
H3F3B-209ENST00000589949 TMEM40Q8WWA1 233 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 ZNF577Q9BSK1 485 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 SLC26A6Q9BXS9 759 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 VPS54Q9P1Q0 977 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 SQORQ9Y6N5 450 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 ATG2AQ2TAZ0 1938 aa20.47■□□□□ 0.87
H3F3B-209ENST00000589949 MYO7AQ13402 2215 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 C5orf67F2Z3F1 127 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 GRM6O15303 877 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 HBP1O60381 514 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 IFNAR1P17181 557 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 KCNA5P22460 613 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 CIITAP33076 1130 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 CTNNB1P35222 781 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 BMPR1AP36894 532 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 GATMP50440 423 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 SLC26A2P50443 739 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 TCEAL5Q5H9L2 206 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 PDXDC2PQ6P474 469 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 BANK1Q8NDB2 785 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 CLP1Q92989 425 aaKnown RBP20.46■□□□□ 0.87
H3F3B-209ENST00000589949 RNF26Q9BY78 433 aaPredicted RBP20.46■□□□□ 0.87
H3F3B-209ENST00000589949 ZSWIM6Q9HCJ5 1215 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 ZNF302Q9NR11 478 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 KDM3AQ9Y4C1 1321 aa20.46■□□□□ 0.87
H3F3B-209ENST00000589949 RALGAPA2Q2PPJ7 1873 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 MGEA5O60502 916 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 REC8O95072 547 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 KRT76Q01546 638 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 LEXMQ3ZCV2 418 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 PRR16Q569H4 304 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 FAM160B1Q5W0V3 765 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 MIS18BP1Q6P0N0 1132 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
H3F3B-209ENST00000589949 MAFBQ9Y5Q3 323 aaPredicted RBP20.45■□□□□ 0.86
H3F3B-209ENST00000589949 C22orf31O95567 290 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 RPLP2P05387 115 aaKnown RBP20.44■□□□□ 0.86
H3F3B-209ENST00000589949 PSMA5P28066 241 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 BTG3Q14201 252 aaPredicted RBP20.44■□□□□ 0.86
H3F3B-209ENST00000589949 COL19A1Q14993 1142 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 PTPROQ16827 1216 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 TRMT1LQ7Z2T5 733 aaKnown RBP20.44■□□□□ 0.86
H3F3B-209ENST00000589949 NME8Q8N427 588 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
H3F3B-209ENST00000589949 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
H3F3B-209ENST00000589949 GJA10Q969M2 543 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 PPP1R16BQ96T49 567 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 EPHX3Q9H6B9 360 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 ERVK-5Q9HDB9 667 aa20.44■□□□□ 0.86
H3F3B-209ENST00000589949 NOC2LQ9Y3T9 749 aaKnown RBP20.44■□□□□ 0.86
H3F3B-209ENST00000589949 MRPL42Q9Y6G3 142 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms