RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 PPFIA3O75145 1194 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 RPLP2P05387 115 aaKnown RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 ARP10275 920 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 PDIA3P30101 505 aaKnown RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 IRS1P35568 1242 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 STAT5BP51692 787 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 NUBP1P53384 320 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 NLRP5P59047 1200 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 ACTR2P61160 394 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 DEFB103AP81534 67 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 GPNMBQ14956 572 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 TIGD5Q53EQ6 642 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 FAM160B1Q5W0V3 765 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 EP400NLQ6ZTU2 488 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 NIPA1Q7RTP0 329 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 FBXL16Q8N461 479 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 CYP2W1Q8TAV3 490 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 ATOH1Q92858 354 aaPredicted RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 APBB2Q92870 758 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 PABPC5Q96DU9 382 aaKnown RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 ZNF577Q9BSK1 485 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 ZMYND12Q9H0C1 365 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 NCOA5Q9HCD5 579 aaKnown RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 AGO4Q9HCK5 861 aaKnown RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 TUBE1Q9UJT0 475 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 TELO2Q9Y4R8 837 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 NFASCO94856 1347 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 TMEM221A6NGB7 291 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 M0R296 226 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 UPP2O95045 317 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 GJB5O95377 273 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 IFNAR1P17181 557 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 HOXC8P31273 242 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
TPM4-211ENST00000589897 SETQ01105 290 aaPredicted RBP9.43□□□□□ -0.9
TPM4-211ENST00000589897 TCF15Q12870 199 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 STK3Q13188 491 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 MBTPS1Q14703 1052 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 PLEKHG4Q58EX7 1191 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 IER5Q5VY09 327 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 PLPPR4Q7Z2D5 763 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 TMCO2Q7Z6W1 182 aaPredicted RBP9.43□□□□□ -0.9
TPM4-211ENST00000589897 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 FBXO22Q8NEZ5 403 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 SAMD11Q96NU1 681 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 IFIH1Q9BYX4 1025 aaKnown RBP9.43□□□□□ -0.9
TPM4-211ENST00000589897 TM6SF1Q9BZW5 370 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 VPS54Q9P1Q0 977 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 MTUS1Q9ULD2 1270 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 SAMM50Q9Y512 469 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 INSL6Q9Y581 213 aa9.43□□□□□ -0.9
TPM4-211ENST00000589897 NID2Q14112 1375 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 LCHNA4D1U4 455 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 LINC01553A4QN01 128 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 FAM86B1E9PN63 330 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 IPO5O00410 1097 aaKnown RBP9.42□□□□□ -0.9
TPM4-211ENST00000589897 CDKL5O76039 1030 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 DEXIO95424 95 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 CYP3A4P08684 503 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 FAM86B2P0C5J1 330 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 INSRRP14616 1297 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 ID4P47928 161 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 SLC26A2P50443 739 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
TPM4-211ENST00000589897 PRR16Q569H4 304 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
TPM4-211ENST00000589897 RUFY4Q6ZNE9 571 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 RNF135Q8IUD6 432 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 BANK1Q8NDB2 785 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 DNAJB3Q8WWF6 145 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 ZNF274Q96GC6 653 aaPredicted RBP9.42□□□□□ -0.9
TPM4-211ENST00000589897 YME1L1Q96TA2 773 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
TPM4-211ENST00000589897 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 FAM49AQ9H0Q0 323 aaPredicted RBP9.42□□□□□ -0.9
TPM4-211ENST00000589897 SLKQ9H2G2 1235 aaPredicted RBP9.42□□□□□ -0.9
TPM4-211ENST00000589897 ZNF302Q9NR11 478 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 SH3GLB2Q9NR46 395 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 MUTYHQ9UIF7 546 aa9.42□□□□□ -0.9
TPM4-211ENST00000589897 MICAL3Q7RTP6 2002 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 MYH9P35579 1960 aaKnown RBP9.41□□□□□ -0.9
TPM4-211ENST00000589897 PTPRSQ13332 1948 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 CHD7Q9P2D1 2997 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 PROB1E7EW31 1015 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 HBP1O60381 514 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 CHRNA1P02708 482 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 PSAPP07602 524 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 GHRP10912 638 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 XBP1P17861 261 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 EVCP57679 992 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 ADAM17P78536 824 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms