RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SMIM35A0A1B0GVV1 85 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 DDX39AO00148 427 aaKnown RBP16.31■□□□□ 0.2
MBD1-220ENST00000589758 ENPP3O14638 875 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 BACH1O14867 736 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
MBD1-220ENST00000589758 CCNE2O96020 404 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 IFNAR1P17181 557 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
MBD1-220ENST00000589758 EPC2Q52LR7 807 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 FAM43BQ6ZT52 329 aaPredicted RBP16.31■□□□□ 0.2
MBD1-220ENST00000589758 FIBCD1Q8N539 461 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 PHKBQ93100 1093 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 FTHL17Q9BXU8 183 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 ZNF302Q9NR11 478 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 TRPV2Q9Y5S1 764 aa16.31■□□□□ 0.2
MBD1-220ENST00000589758 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
MBD1-220ENST00000589758 COL1A2P08123 1366 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 H3BNC9 293 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 RBAK-RBAKDNI3L0D1 243 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 KCNQ1P51787 676 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
MBD1-220ENST00000589758 ZNF746Q6NUN9 644 aaPredicted RBP16.3■□□□□ 0.2
MBD1-220ENST00000589758 MTHFD1LQ6UB35 978 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 TMEM192Q8IY95 271 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 SMAP1Q8IYB5 467 aaPredicted RBP16.3■□□□□ 0.2
MBD1-220ENST00000589758 ATP8B4Q8TF62 1192 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 TRAPPC12Q8WVT3 735 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
MBD1-220ENST00000589758 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
MBD1-220ENST00000589758 SH3GLB2Q9NR46 395 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 RWDD3Q9Y3V2 267 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 CYP46A1Q9Y6A2 500 aa16.3■□□□□ 0.2
MBD1-220ENST00000589758 KDM3AQ9Y4C1 1321 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 KLRC1P26715 233 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 CIITAP33076 1130 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 KRT76Q01546 638 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 GPM6BQ13491 265 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 PDXDC2PQ6P474 469 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 CCDC60Q8IWA6 550 aaPredicted RBP16.29■□□□□ 0.2
MBD1-220ENST00000589758 TRIM22Q8IYM9 498 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 TM6SF1Q9BZW5 370 aa16.29■□□□□ 0.2
MBD1-220ENST00000589758 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
MBD1-220ENST00000589758 IGSF9BQ9UPX0 1349 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 RB1P06400 928 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 CD52P31358 61 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 USP11P51784 963 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 TMEM62Q0P6H9 643 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 PAK2Q13177 524 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
MBD1-220ENST00000589758 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 PRR16Q569H4 304 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 CKAP2LQ8IYA6 745 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
MBD1-220ENST00000589758 ZNF274Q96GC6 653 aaPredicted RBP16.28■□□□□ 0.2
MBD1-220ENST00000589758 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
MBD1-220ENST00000589758 ADGRA3Q8IWK6 1321 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 CPLX1O14810 134 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 DGKIO75912 1065 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 PSAPP07602 524 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 NLRP5P59047 1200 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 ODR4Q5SWX8 454 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 ZNF689Q96CS4 500 aaPredicted RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 RC3H2Q9HBD1 1191 aaKnown RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 NCOA5Q9HCD5 579 aaKnown RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 PADI3Q9ULW8 664 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 PCDHA10Q9Y5I2 948 aa16.27■□□□□ 0.2
MBD1-220ENST00000589758 MAFBQ9Y5Q3 323 aaPredicted RBP16.27■□□□□ 0.2
MBD1-220ENST00000589758 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.19
MBD1-220ENST00000589758 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.19
MBD1-220ENST00000589758 TTC3P53804 2025 aa16.26■□□□□ 0.19
MBD1-220ENST00000589758 C5orf67F2Z3F1 127 aa16.26■□□□□ 0.19
MBD1-220ENST00000589758 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
MBD1-220ENST00000589758 BTG3Q14201 252 aaPredicted RBP16.26■□□□□ 0.19
MBD1-220ENST00000589758 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
MBD1-220ENST00000589758 CLP1Q92989 425 aaKnown RBP16.26■□□□□ 0.19
MBD1-220ENST00000589758 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
MBD1-220ENST00000589758 UBE2ZQ9H832 354 aaPredicted RBP16.26■□□□□ 0.19
MBD1-220ENST00000589758 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
MBD1-220ENST00000589758 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
MBD1-220ENST00000589758 WDR64B1ANS9 1081 aa16.25■□□□□ 0.19
MBD1-220ENST00000589758 PPFIA3O75145 1194 aa16.25■□□□□ 0.19
MBD1-220ENST00000589758 DEXIO95424 95 aa16.25■□□□□ 0.19
MBD1-220ENST00000589758 ATP4AP20648 1035 aa16.25■□□□□ 0.19
MBD1-220ENST00000589758 CTNNB1P35222 781 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms