RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ANGPTL2Q9UKU9 493 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 DDX19BQ9UMR2 479 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 NAV2Q8IVL1 2488 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 RALGAPA1Q6GYQ0 2036 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 MYH15Q9Y2K3 1946 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 SOBPA7XYQ1 873 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 OPLAHO14841 1288 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 SLC30A4O14863 429 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 N4BP1O75113 896 aaKnown RBP7.13□□□□□ -1.27
VPS25-204ENST00000589577 LRRN2O75325 713 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 NR3C2P08235 984 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 PDHBP11177 359 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 SCG2P13521 617 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 SHC2P98077 582 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 ARHGAP4P98171 946 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 RARS2Q5T160 578 aaKnown RBP7.13□□□□□ -1.27
VPS25-204ENST00000589577 THNSL1Q8IYQ7 743 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 IL31RAQ8NI17 732 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 RSAD2Q8WXG1 361 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 MRPS27Q92552 414 aaKnown RBP7.13□□□□□ -1.27
VPS25-204ENST00000589577 EPC1Q9H2F5 836 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 CPVLQ9H3G5 476 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 TMX1Q9H3N1 280 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 CWH43Q9H720 699 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 PXMP2Q9NR77 195 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 WNT16Q9UBV4 365 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 DBR1Q9UK59 544 aaKnown RBP7.13□□□□□ -1.27
VPS25-204ENST00000589577 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
VPS25-204ENST00000589577 LZTS1Q9Y250 596 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 PCDHB12Q9Y5F1 795 aa7.13□□□□□ -1.27
VPS25-204ENST00000589577 CCDC171Q6TFL3 1326 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 C2orf71A6NGG8 1288 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 M0R2C6 588 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 STK25O00506 426 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 SPTLC1O15269 473 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 FOXP2O15409 715 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 GPAA1O43292 621 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 CLASP2O75122 1294 aaKnown RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 ZIC2O95409 532 aaPredicted RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 PROS1P07225 676 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 PBX3P40426 434 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 PLCB3Q01970 1234 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 C1QBPQ07021 282 aaKnown RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 PPARAQ07869 468 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 AAMPQ13685 434 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 ZNF528Q3MIS6 628 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 XRRA1Q6P2D8 792 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 IFNL3Q8IZI9 196 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 CLASRPQ8N2M8 674 aaKnown RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 ZBTB44Q8NCP5 570 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 ZBTB10Q96DT7 871 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 ZFP91Q96JP5 570 aaPredicted RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 ENTPD7Q9NQZ7 604 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 TYW1Q9NV66 732 aaKnown RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 ZMIZ1Q9ULJ6 1067 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 CA14Q9ULX7 337 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 USP18Q9UMW8 372 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 CDY2AQ9Y6F7 541 aa7.12□□□□□ -1.27
VPS25-204ENST00000589577 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.12□□□□□ -1.27
VPS25-204ENST00000589577 NRCAMQ92823 1304 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 UNC79Q9P2D8 2635 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 TSPY2A6NKD2 308 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 TBKBP1A7MCY6 615 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 C1QTNF9BB2RNN3 333 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 MGEA5O60502 916 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 LILRB5O75023 590 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 IFIT2P09913 472 aaKnown RBP7.11□□□□□ -1.27
VPS25-204ENST00000589577 C1QTNF9P0C862 333 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 STAG3L1P0CL83 205 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 SNHG28P0DPA3 235 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 GNAT1P11488 350 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 EPCAMP16422 314 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 PDE4AP27815 886 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 ZNF543Q08ER8 600 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 MARCH8Q5T0T0 291 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 SPOUT1Q5T280 376 aaKnown RBP7.11□□□□□ -1.27
VPS25-204ENST00000589577 FAM102BQ5T8I3 360 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 ARHGEF16Q5VV41 709 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 PHLDB3Q6NSJ2 640 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 ZSCAN25Q6NSZ9 544 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 TAF2Q6P1X5 1199 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 LRRC55Q6ZSA7 311 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 MRPL43Q8N983 215 aaKnown RBP7.11□□□□□ -1.27
VPS25-204ENST00000589577 PJA1Q8NG27 643 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 GPR152Q8TDT2 470 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 DNAJB3Q8WWF6 145 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 APPBP2Q92624 585 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 NELL1Q92832 810 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 GPR20Q99678 358 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 TMEM47Q9BQJ4 181 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 PDCD2LQ9BRP1 358 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 FTHL17Q9BXU8 183 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 FOXQ1Q9C009 403 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 MAF1Q9H063 256 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 NGRNQ9NPE2 291 aaKnown RBP7.11□□□□□ -1.27
VPS25-204ENST00000589577 PNMA2Q9UL42 364 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 PADI3Q9ULW8 664 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 SIT1Q9Y3P8 196 aa7.11□□□□□ -1.27
VPS25-204ENST00000589577 CELSR3Q9NYQ7 3312 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 ABCB11O95342 1321 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms