RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PDCD2LQ9BRP1 358 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 RUSC1Q9BVN2 902 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 TEX13BQ9BXU2 312 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 BHMT2Q9H2M3 363 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 KCNH7Q9NS40 1196 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 HOXC10Q9NYD6 342 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 ZNF214Q9UL59 606 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 R3HCC1Q9Y3T6 440 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 PLXNB2O15031 1838 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 FRMD3A2A2Y4 597 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 LRRC10BA6NIK2 292 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 USP27XA6NNY8 438 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 ATP2A1O14983 1001 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 SLITRK3O94933 977 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 PRKCSHP14314 528 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-206ENST00000588860 MUTP22033 750 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 UBXN1Q04323 297 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 RBL2Q08999 1139 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 ITGB3BPQ13352 177 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-206ENST00000588860 TRIM14Q14142 442 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 XRRA1Q6P2D8 792 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 B3GNT9Q6UX72 402 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 MOB2Q70IA6 237 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 SFR1Q86XK3 245 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 NELFCDQ8IXH7 590 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 ANKRD13AQ8IZ07 590 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 CCAR2Q8N163 923 aaKnown RBP9.71□□□□□ -0.86
SMAD4-206ENST00000588860 TC2NQ8N9U0 490 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 BANK1Q8NDB2 785 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 PIGOQ8TEQ8 1089 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.86
SMAD4-206ENST00000588860 CPLX3Q8WVH0 158 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 NACC1Q96RE7 527 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 BAG1Q99933 345 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-206ENST00000588860 LXNQ9BS40 222 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 FGFBP2Q9BYJ0 223 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 TCEAL9Q9UHQ7 104 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 PCDHA2Q9Y5H9 948 aa9.71□□□□□ -0.86
SMAD4-206ENST00000588860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMAD4-206ENST00000588860 A0A0G2JLL6 359 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 RSPH10B2B2RC85 870 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 B4DLN1 442 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 DHX15O43143 795 aaKnown RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 MFAP3LO75121 409 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 FAM13AO94988 1023 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 KIF20AO95235 890 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 RSPH10BP0C881 870 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 GAP43P17677 238 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 KCNJ6P48051 423 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 PPATQ06203 517 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 CEP135Q66GS9 1140 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 RINT1Q6NUQ1 792 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 ARMC9Q7Z3E5 817 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 PRRT2Q7Z6L0 340 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 NLRX1Q86UT6 975 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 ERO1BQ86YB8 467 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TMEM139Q8IV31 216 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 MB21D1Q8N884 522 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 NSUN6Q8TEA1 469 aaKnown RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 EEF2KMTQ96G04 330 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 C16orf45Q96MC5 204 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 PANX2Q96RD6 677 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TUBGCP2Q9BSJ2 902 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 NOC4LQ9BVI4 516 aaKnown RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TMX1Q9H3N1 280 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TBC1D22BQ9NU19 505 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TRMT1Q9NXH9 659 aaKnown RBP9.7□□□□□ -0.86
SMAD4-206ENST00000588860 CYP39A1Q9NYL5 469 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TSKSQ9UJT2 592 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 SAMM50Q9Y512 469 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 COL4A3BPQ9Y5P4 624 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 TRPM7Q96QT4 1865 aa9.7□□□□□ -0.86
SMAD4-206ENST00000588860 A0A1W2PQC6 194 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 ARHGEF35A5YM69 484 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 IQCA1LA6NCM1 817 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 SPDYE5A6NIY4 337 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 IRF6O14896 467 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 ARHGAP6O43182 974 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 CCP110O43303 1012 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 GYPCP04921 128 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 P4HBP07237 508 aaKnown RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 NR3C2P08235 984 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 MYBP10242 640 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 CASP14P31944 242 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 DNM2P50570 870 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 IRX3P78415 501 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 PPIL2Q13356 520 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 FKBP15Q5T1M5 1219 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 FOXR2Q6PJQ5 311 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 LRRC55Q6ZSA7 311 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 C1orf186Q6ZWK4 172 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 CHST13Q8NET6 341 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 ZNF507Q8TCN5 953 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 SCFD1Q8WVM8 642 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 MAF1Q9H063 256 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms