RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ZNF658Q5TYW1 1059 aaPredicted RBP24.79■■□□□ 1.56
ATG4D-209ENST00000588857 SWSAP1Q6NVH7 229 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 TAPT1Q6NXT6 567 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 UNC13DQ70J99 1090 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 APBA2Q99767 749 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 GTPBP4Q9BZE4 634 aaKnown RBP24.79■■□□□ 1.56
ATG4D-209ENST00000588857 GJD2Q9UKL4 321 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 ZBTB39O15060 712 aa24.78■■□□□ 1.56
ATG4D-209ENST00000588857 RHOBTB3O94955 611 aa24.78■■□□□ 1.56
ATG4D-209ENST00000588857 ATG7O95352 703 aa24.78■■□□□ 1.56
ATG4D-209ENST00000588857 XRCC6P12956 609 aaKnown RBP eCLIP24.78■■□□□ 1.56
ATG4D-209ENST00000588857 IDEP14735 1019 aa24.78■■□□□ 1.56
ATG4D-209ENST00000588857 CCDC43Q96MW1 224 aaKnown RBP24.78■■□□□ 1.56
ATG4D-209ENST00000588857 BPIFA3Q9BQP9 254 aa24.78■■□□□ 1.56
ATG4D-209ENST00000588857 RBM47A0AV96 593 aaKnown RBP24.77■■□□□ 1.56
ATG4D-209ENST00000588857 ARHGEF35A5YM69 484 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 ZSWIM8A7E2V4 1837 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 CTGFP29279 349 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 YWHABP31946 246 aaKnown RBP24.77■■□□□ 1.56
ATG4D-209ENST00000588857 ACVR2BQ13705 512 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 DNAJC19Q96DA6 116 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 KATNBL1Q9H079 304 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 DBR1Q9UK59 544 aaKnown RBP24.77■■□□□ 1.56
ATG4D-209ENST00000588857 PTPN22Q9Y2R2 807 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 TELO2Q9Y4R8 837 aa24.77■■□□□ 1.56
ATG4D-209ENST00000588857 BECN2A8MW95 431 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 NOP56O00567 594 aaKnown RBP24.76■■□□□ 1.55
ATG4D-209ENST00000588857 ARSHQ5FYA8 562 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 OLFML2BQ68BL8 750 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 LUZP1Q86V48 1076 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 CCDC65Q8IXS2 484 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 SEPT1Q8WYJ6 367 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 TRIM47Q96LD4 638 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 ARHGAP39Q9C0H5 1083 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 ZHX1Q9UKY1 873 aaPredicted RBP24.76■■□□□ 1.55
ATG4D-209ENST00000588857 UVSSAQ2YD98 709 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 RINT1Q6NUQ1 792 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 CCDC60Q8IWA6 550 aaPredicted RBP24.76■■□□□ 1.55
ATG4D-209ENST00000588857 SPATA33Q96N06 139 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 ZNF302Q9NR11 478 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 PANK4Q9NVE7 773 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 KCND2Q9NZV8 630 aa24.76■■□□□ 1.55
ATG4D-209ENST00000588857 MYH11P35749 1972 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 NPHP3-ACAD11A0A0J9YXS1 232 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 GSTTP1A0A1W2PQM5 241 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 GOLGA6L19H0YKK7 550 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 GNRH1P01148 92 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 RAD51AP2Q09MP3 1159 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 CT47A1Q5JQC4 288 aaPredicted RBP24.75■■□□□ 1.55
ATG4D-209ENST00000588857 OTUD6AQ7L8S5 288 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 RUSC1Q9BVN2 902 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 ANKEF1Q9NU02 776 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 FLRT1Q9NZU1 646 aa24.75■■□□□ 1.55
ATG4D-209ENST00000588857 IGSF9BQ9UPX0 1349 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 GH1P01241 217 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 ADCYAP1R1P41586 468 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 IRF5Q13568 498 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 LAMC2Q13753 1193 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 GIT2Q14161 759 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 IQCB1Q15051 598 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 FAM160B1Q5W0V3 765 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 IQSEC1Q6DN90 963 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 SMYD4Q8IYR2 804 aaPredicted RBP24.74■■□□□ 1.55
ATG4D-209ENST00000588857 COPS5Q92905 334 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 GPR20Q99678 358 aa24.74■■□□□ 1.55
ATG4D-209ENST00000588857 ARID2Q68CP9 1835 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 IGKV6D-21A0A0A0MT36 114 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 TCF7P36402 384 aaPredicted RBP24.73■■□□□ 1.55
ATG4D-209ENST00000588857 PSMD2Q13200 908 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 CCL14Q16627 93 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 UTP14CQ5TAP6 766 aaKnown RBP24.73■■□□□ 1.55
ATG4D-209ENST00000588857 C1orf186Q6ZWK4 172 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 TRMT1LQ7Z2T5 733 aaKnown RBP24.73■■□□□ 1.55
ATG4D-209ENST00000588857 AOPEPQ8N6M6 819 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 REEP2Q9BRK0 252 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 AZI2Q9H6S1 392 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 GDAQ9Y2T3 454 aa24.73■■□□□ 1.55
ATG4D-209ENST00000588857 MAFBQ9Y5Q3 323 aaPredicted RBP24.73■■□□□ 1.55
ATG4D-209ENST00000588857 SMTNL1A8MU46 457 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 ZNF862O60290 1169 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 TBCAO75347 108 aaKnown RBP24.72■■□□□ 1.55
ATG4D-209ENST00000588857 XRCC5P13010 732 aaKnown RBP24.72■■□□□ 1.55
ATG4D-209ENST00000588857 ERCC5P28715 1186 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-209ENST00000588857 RARRES1P49788 294 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 PRKCEQ02156 737 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 CACNB1Q02641 598 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-209ENST00000588857 COASYQ13057 564 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 STIM1Q13586 685 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 HSDL1Q3SXM5 330 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 XKR9Q5GH70 373 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 TMEM63BQ5T3F8 832 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 PADI6Q6TGC4 694 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 DHX40Q8IX18 779 aaKnown RBP24.72■■□□□ 1.55
ATG4D-209ENST00000588857 ZHX3Q9H4I2 956 aa24.72■■□□□ 1.55
ATG4D-209ENST00000588857 PPP1R3GB7ZBB8 358 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 CYP2C19P33261 490 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 STAT5BP51692 787 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 ARHGAP1Q07960 439 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 CCDC144BQ3MJ40 725 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 DUSP28Q4G0W2 176 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms