RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 EMID1Q96A84 441 aaPredicted RBP34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 MAFBQ9Y5Q3 323 aaPredicted RBP34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 GSTTP1A0A1W2PQM5 241 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 FRMD3A2A2Y4 597 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 GH1P01241 217 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 ERCC5P28715 1186 aaPredicted RBP34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 UGCGQ16739 394 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 COBLL1Q53SF7 1204 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 FAM160B1Q5W0V3 765 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 CCDC60Q8IWA6 550 aaPredicted RBP34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 AFAP1L1Q8TED9 768 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 ZNF302Q9NR11 478 aa34.52■■■■□ 3.12
CAPNS1-206ENST00000588815 SMTNL1A8MU46 457 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 NOP56O00567 594 aaKnown RBP34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 BACH1O14867 736 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 IKBKBO14920 756 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 TBC1D8O95759 1140 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 IGHA2P01877 340 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 CYP2B6P20813 491 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 CTGFP29279 349 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 EHHADHQ08426 723 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 C1orf186Q6ZWK4 172 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 TRIM47Q96LD4 638 aa34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 CCDC43Q96MW1 224 aaKnown RBP34.51■■■■□ 3.11
CAPNS1-206ENST00000588815 BECN2A8MW95 431 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 IDEP14735 1019 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 RARRES1P49788 294 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 STIM1Q13586 685 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 GIT2Q14161 759 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 TIPINQ9BVW5 301 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 PANK4Q9NVE7 773 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 ODF2LQ9ULJ1 636 aa34.5■■■■□ 3.11
CAPNS1-206ENST00000588815 TRPA1O75762 1119 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 GUCY2CP25092 1073 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 DUSP28Q4G0W2 176 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 XKR3Q5GH77 459 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 SPATA33Q96N06 139 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 GPR20Q99678 358 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 SAGE1Q9NXZ1 904 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 NRBP1Q9UHY1 535 aa34.49■■■■□ 3.11
CAPNS1-206ENST00000588815 GOLGA6L19H0YKK7 550 aa34.48■■■■□ 3.11
CAPNS1-206ENST00000588815 TRMT44Q8IYL2 757 aaKnown RBP34.48■■■■□ 3.11
CAPNS1-206ENST00000588815 EMSYQ7Z589 1322 aa34.48■■■■□ 3.11
CAPNS1-206ENST00000588815 ZBTB39O15060 712 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 ZNF862O60290 1169 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 LGR5O75473 907 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 TCF7P36402 384 aaPredicted RBP34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 ARHGAP1Q07960 439 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 COASYQ13057 564 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 LUZP1Q86V48 1076 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 REEP2Q9BRK0 252 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 RUSC1Q9BVN2 902 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 AZI2Q9H6S1 392 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 FLRT1Q9NZU1 646 aa34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 ZHX1Q9UKY1 873 aaPredicted RBP34.47■■■■□ 3.11
CAPNS1-206ENST00000588815 PPP1R3GB7ZBB8 358 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 SORBS3O60504 671 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 ECM2O94769 699 aaPredicted RBP34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 GAP43P17677 238 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 ADCYAP1R1P41586 468 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 PRKCEQ02156 737 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 PADI6Q6TGC4 694 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 DHX40Q8IX18 779 aaKnown RBP34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 COL4A3BPQ9Y5P4 624 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 TBCAO75347 108 aaKnown RBP34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 SLC26A2P50443 739 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 STAT5BP51692 787 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 MYL5Q02045 173 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 HSDL1Q3SXM5 330 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 PLPPR4Q7Z2D5 763 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 FAM167AQ96KS9 214 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 ARHGAP39Q9C0H5 1083 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 TELO2Q9Y4R8 837 aa34.46■■■■□ 3.11
CAPNS1-206ENST00000588815 STBD1O95210 358 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 GNRH1P01148 92 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 HOXD10P28358 340 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 TPM4P67936 248 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 CCDC144BQ3MJ40 725 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 ANO5Q75V66 913 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 AOPEPQ8N6M6 819 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 PPTC7Q8NI37 304 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 ENOX1Q8TC92 643 aaKnown RBP34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 SEL1LQ9UBV2 794 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 GDAQ9Y2T3 454 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 PPME1Q9Y570 386 aa34.45■■■■□ 3.1
CAPNS1-206ENST00000588815 CCL14Q16627 93 aa34.44■■■■□ 3.1
CAPNS1-206ENST00000588815 XKR9Q5GH70 373 aa34.44■■■■□ 3.1
CAPNS1-206ENST00000588815 ADSSL1Q8N142 457 aa34.44■■■■□ 3.1
CAPNS1-206ENST00000588815 COPS5Q92905 334 aa34.44■■■■□ 3.1
CAPNS1-206ENST00000588815 OATP04181 439 aa34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 ZNF865P0CJ78 1059 aaPredicted RBP34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 PRCPP42785 496 aa34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 STK4Q13043 487 aa34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 FAM26FQ5R3K3 315 aa34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 DHTKD1Q96HY7 919 aaPredicted RBP34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 PCYT2Q99447 389 aa34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 NRBP2Q9NSY0 501 aa34.43■■■■□ 3.1
CAPNS1-206ENST00000588815 NPHP3-ACAD11A0A0J9YXS1 232 aa34.42■■■■□ 3.1
CAPNS1-206ENST00000588815 PSMA7O14818 248 aa34.42■■■■□ 3.1
CAPNS1-206ENST00000588815 CD44P16070 742 aaKnown RBP34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms