RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 GPR108Q9NPR9 543 aa4.76□□□□□ -1.65
LIG3-211ENST00000588713 ANO2Q9NQ90 1003 aa4.76□□□□□ -1.65
LIG3-211ENST00000588713 GINM1Q9NU53 330 aa4.76□□□□□ -1.65
LIG3-211ENST00000588713 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
LIG3-211ENST00000588713 GMPR2Q9P2T1 348 aaKnown RBP4.76□□□□□ -1.65
LIG3-211ENST00000588713 ABCF2Q9UG63 623 aa4.76□□□□□ -1.65
LIG3-211ENST00000588713 GNEQ9Y223 722 aaKnown RBP4.76□□□□□ -1.65
LIG3-211ENST00000588713 PCDHGA2Q9Y5H1 932 aa4.76□□□□□ -1.65
LIG3-211ENST00000588713 ANKRD17O75179 2603 aaKnown RBP4.76□□□□□ -1.65
LIG3-211ENST00000588713 TENM4Q6N022 2769 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 KRBA1A5PL33 1030 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 TULP2O00295 520 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 CHL1O00533 1208 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 GIPC1O14908 333 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 AP5Z1O43299 807 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 FIBPO43427 364 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 LAMTOR5O43504 91 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 NARSO43776 548 aaKnown RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 SMARCA5O60264 1052 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 TBC1D4O60343 1298 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 LRRN2O75325 713 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 WFS1O76024 890 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 CXCL10P02778 98 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 TUBB4AP04350 444 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 GNAI2P04899 355 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 GNAI3P08754 354 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 WEE2P0C1S8 567 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 SRGAP2BP0DMP2 458 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 HOXD8P13378 290 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 TNNT1P13805 278 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 DNAJB1P25685 340 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 PLCD1P51178 756 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 NOVA1P51513 510 aaKnown RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 ZNF75DP51815 510 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 KRT85P78386 507 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 TYRO3Q06418 890 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 TDGQ13569 410 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 PTGISQ16647 500 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 LRRC24Q50LG9 513 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 FOXD4L5Q5VV16 416 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 SNRNP48Q6IEG0 339 aaKnown RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 ZSCAN25Q6NSZ9 544 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 ANKRD54Q6NXT1 300 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 TSSK4Q6SA08 328 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 RNF19BQ6ZMZ0 732 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.75□□□□□ -1.65
LIG3-211ENST00000588713 EEPD1Q7L9B9 569 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 RIOX2Q8IUF8 465 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 CCDC144CPQ8IYA2 1237 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 TEX11Q8IYF3 940 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 C8orf58Q8NAV2 365 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 FOXD4L4Q8WXT5 416 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 KIF1BPQ96EK5 621 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 MRFAP1L1Q96HT8 127 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 ZSCAN31Q96LW9 406 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 C16orf45Q96MC5 204 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 ZNF830Q96NB3 372 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 MEIS3Q99687 375 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 MKNK1Q9BUB5 465 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 S1PR5Q9H228 398 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 GDPD2Q9HCC8 539 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 ZSCAN32Q9NX65 697 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 SAP30BPQ9UHR5 308 aaKnown RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 NAP1L2Q9ULW6 460 aaPredicted RBP4.75□□□□□ -1.65
LIG3-211ENST00000588713 DUSP12Q9UNI6 340 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 PLAGL2Q9UPG8 496 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 LIMCH1Q9UPQ0 1083 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 SMC3Q9UQE7 1217 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 SIT1Q9Y3P8 196 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 RWDD3Q9Y3V2 267 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 MRVI1Q9Y6F6 885 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 NLRC5Q86WI3 1866 aa4.75□□□□□ -1.65
LIG3-211ENST00000588713 ITPR1Q14643 2758 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 FANCMQ8IYD8 2048 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 GPR75-ASB3A0A0A6YYF3 556 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 SGSM2O43147 1006 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 PPFIA3O75145 1194 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 PDE8BO95263 885 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 MMP3P08254 477 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 CKBP12277 381 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 PDCP20941 246 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 SYT1P21579 422 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 STAT3P40763 770 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 PURAQ00577 322 aaKnown RBP4.74□□□□□ -1.65
LIG3-211ENST00000588713 PUM3Q15397 648 aaKnown RBP4.74□□□□□ -1.65
LIG3-211ENST00000588713 CSRP2Q16527 193 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 MUM1L1Q5H9M0 696 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 VPS53Q5VIR6 699 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 CEP135Q66GS9 1140 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 LAIR1Q6GTX8 287 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 GIMAP6Q6P9H5 292 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 PROSER1Q86XN7 944 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 MAPKAPK5Q8IW41 473 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 SPICE1Q8N0Z3 855 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 FAM133AQ8N9E0 248 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 DBF4BQ8NFT6 615 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 POF1BQ8WVV4 589 aa4.74□□□□□ -1.65
LIG3-211ENST00000588713 DHX38Q92620 1227 aaKnown RBP4.74□□□□□ -1.65
LIG3-211ENST00000588713 MTG1Q9BT17 334 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms