RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-208ENST00000588692 CYP3A7-CYP3A51PA0A087WV96 503 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 SMIM35A0A1B0GVV1 85 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 M0QZ92 97 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 MSH4O15457 936 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 EDIL3O43854 480 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 CYP3A7P24462 503 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 NEK4P51957 841 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 ZNF484Q5JVG2 852 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 MTHFD1LQ6UB35 978 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX39A-208ENST00000588692 NME8Q8N427 588 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-208ENST00000588692 SLC5A5Q92911 643 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 GTF3C6Q969F1 213 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 FAM49AQ9H0Q0 323 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-208ENST00000588692 SAMM50Q9Y512 469 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 CDY2AQ9Y6F7 541 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 SQORQ9Y6N5 450 aa16.35■□□□□ 0.21
DDX39A-208ENST00000588692 IGSF9BQ9UPX0 1349 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 UNC80Q8N2C7 3258 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 GAS7O60861 476 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 CTDNEP1O95476 244 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 SEC24BO95487 1268 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 GHRP10912 638 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 SFNP31947 248 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 FBXO47Q5MNV8 452 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 LRCH2Q5VUJ6 765 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 TSHZ1Q6ZSZ6 1077 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 TMCO2Q7Z6W1 182 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-208ENST00000588692 MYOCDQ8IZQ8 938 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 USP38Q8NB14 1042 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 FAM167AQ96KS9 214 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 MBOAT7Q96N66 472 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 UIMC1Q96RL1 719 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 TEKT3Q9BXF9 490 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 ORC3Q9UBD5 711 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-208ENST00000588692 KCNJ14Q9UNX9 436 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 INSL6Q9Y581 213 aa16.34■□□□□ 0.21
DDX39A-208ENST00000588692 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-208ENST00000588692 CCDC194A0A1B0GVG4 234 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 IGFBP4P22692 258 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 JAK3P52333 1124 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-208ENST00000588692 LPIN1Q14693 890 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 ME3Q16798 604 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 CEP131Q9UPN4 1083 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 LOXHD1Q8IVV2 1947 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 KDM3AQ9Y4C1 1321 aa16.33■□□□□ 0.2
DDX39A-208ENST00000588692 PRUNE2Q8WUY3 3088 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-208ENST00000588692 LCHNA4D1U4 455 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 ARHGEF15O94989 841 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 TDP2O95551 362 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 POU3F3P20264 500 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-208ENST00000588692 ATP4AP20648 1035 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 KLRC1P26715 233 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 INF2Q27J81 1249 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 FAM43BQ6ZT52 329 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-208ENST00000588692 RDM1Q8NG50 284 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 ARNTL2Q8WYA1 636 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 TOP1MTQ969P6 601 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 ZBTB10Q96DT7 871 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 NAP1L4Q99733 375 aaKnown RBP16.32■□□□□ 0.2
DDX39A-208ENST00000588692 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
DDX39A-208ENST00000588692 ZBTB42B2RXF5 422 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 GTPBP6O43824 516 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-208ENST00000588692 PSMD10O75832 226 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 LARGE1O95461 756 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 GCFC2P16383 781 aaKnown RBP16.31■□□□□ 0.2
DDX39A-208ENST00000588692 FAM117BQ6P1L5 589 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 NECAB1Q8N987 351 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-208ENST00000588692 EVPLQ92817 2033 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 TGS1Q96RS0 853 aaKnown RBP16.31■□□□□ 0.2
DDX39A-208ENST00000588692 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
DDX39A-208ENST00000588692 CERS4Q9HA82 394 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
DDX39A-208ENST00000588692 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
DDX39A-208ENST00000588692 A0A0C4DFX4 3053 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 LINC01553A4QN01 128 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 C22orf31O95567 290 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 ETNPPLQ8TBG4 499 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 FTHL17Q9BXU8 183 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 UNC45AQ9H3U1 944 aa16.3■□□□□ 0.2
DDX39A-208ENST00000588692 MAGEB2O15479 319 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 CHMP2AO43633 222 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 OATP04181 439 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 FDPSP14324 419 aaKnown RBP16.29■□□□□ 0.2
DDX39A-208ENST00000588692 ERVK-21P61565 698 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms