RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 LOXHD1Q8IVV2 1947 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 CKBP12277 381 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 IGBP1P78318 339 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 RILPL1Q5EBL4 403 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 NCAPH2Q6IBW4 605 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 RUFY4Q6ZNE9 571 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 CKAP2LQ8IYA6 745 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 TMEM199Q8N511 208 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 CCDC155Q8N6L0 562 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 BBXQ8WY36 941 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-207ENST00000588542 TNPO1Q92973 898 aaKnown RBP22.73■■□□□ 1.23
DDX39A-207ENST00000588542 VWCEQ96DN2 955 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 ZBTB10Q96DT7 871 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 UBE2OQ9C0C9 1292 aaKnown RBP22.73■■□□□ 1.23
DDX39A-207ENST00000588542 TUBE1Q9UJT0 475 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 MTMR6Q9Y217 621 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 ARID2Q68CP9 1835 aa22.73■■□□□ 1.23
DDX39A-207ENST00000588542 TRIOBPQ9H2D6 2365 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 STBD1O95210 358 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 OR52Z1P0C646 297 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 IQCF3P0C7M6 154 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 PRKCEQ02156 737 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 EPHA7Q15375 998 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 TRAF7Q6Q0C0 670 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 C16orf59Q7L2K0 433 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 BRAPQ7Z569 592 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 FERMT3Q86UX7 667 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 BANK1Q8NDB2 785 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 COL1A2P08123 1366 aa22.72■■□□□ 1.23
DDX39A-207ENST00000588542 OATP04181 439 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 RESTQ13127 1097 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 PTGDRQ13258 359 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 ZNF484Q5JVG2 852 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 ZNF618Q5T7W0 954 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 TRMT1LQ7Z2T5 733 aaKnown RBP22.71■■□□□ 1.23
DDX39A-207ENST00000588542 RETREG2Q8NC44 543 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 FAM167AQ96KS9 214 aa22.71■■□□□ 1.23
DDX39A-207ENST00000588542 WRAP73Q9P2S5 460 aaPredicted RBP22.71■■□□□ 1.23
DDX39A-207ENST00000588542 LAMA2P24043 3122 aaKnown RBP22.7■■□□□ 1.22
DDX39A-207ENST00000588542 STX6O43752 255 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 P4HBP07237 508 aaKnown RBP22.7■■□□□ 1.22
DDX39A-207ENST00000588542 HSP90AA1P07900 732 aaKnown RBP22.7■■□□□ 1.22
DDX39A-207ENST00000588542 SELPP16109 830 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 PSMC5P62195 406 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 PPIGQ13427 754 aaKnown RBP eCLIP22.7■■□□□ 1.223e-7■■□□□ 13
DDX39A-207ENST00000588542 GPNMBQ14956 572 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 MTHFD1LQ6UB35 978 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 LRRC8DQ7L1W4 858 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 SPRYD3Q8NCJ5 442 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 DYDC2Q96IM9 177 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 RGL1Q9NZL6 768 aa22.7■■□□□ 1.22
DDX39A-207ENST00000588542 LAMA3Q16787 3333 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 POTEMA6NI47 508 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 KLRC1P26715 233 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 THPOP40225 353 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 QARSP47897 775 aaKnown RBP22.69■■□□□ 1.22
DDX39A-207ENST00000588542 C9orf50Q5SZB4 431 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 RPAINQ86UA6 219 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 EIF2AK1Q9BQI3 630 aaKnown RBP22.69■■□□□ 1.22
DDX39A-207ENST00000588542 IL23AQ9NPF7 189 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 NRBP2Q9NSY0 501 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 PCDHA2Q9Y5H9 948 aa22.69■■□□□ 1.22
DDX39A-207ENST00000588542 TMEM150BA6NC51 233 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 RBAK-RBAKDNI3L0D1 243 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 SLITRK3O94933 977 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 ACRP10323 421 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 TECP42680 631 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 TARBP2Q15633 366 aaKnown RBP22.68■■□□□ 1.22
DDX39A-207ENST00000588542 XKR3Q5GH77 459 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 TAF2Q6P1X5 1199 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 HSD17B14Q9BPX1 270 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.68■■□□□ 1.222e-12■■□□□ 11.7
DDX39A-207ENST00000588542 LXNQ9BS40 222 aa22.68■■□□□ 1.22
DDX39A-207ENST00000588542 NIFKQ9BYG3 293 aaKnown RBP22.68■■□□□ 1.22
DDX39A-207ENST00000588542 A0A1W2PPC1 479 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 CAND2O75155 1236 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 C22orf31O95567 290 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 RFC2P35250 354 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 FXR2P51116 673 aaKnown RBP eCLIP22.67■■□□□ 1.22
DDX39A-207ENST00000588542 CTTNQ14247 550 aaKnown RBP22.67■■□□□ 1.22
DDX39A-207ENST00000588542 MBTPS1Q14703 1052 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 SHHQ15465 462 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 IL17AQ16552 155 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 TMEM240Q5SV17 173 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 ANO5Q75V66 913 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 TDHQ8IZJ6 230 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 DNAJB3Q8WWF6 145 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 CEP89Q96ST8 783 aa22.67■■□□□ 1.22
DDX39A-207ENST00000588542 SMIM35A0A1B0GVV1 85 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 LAD1O00515 517 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 PRPHP41219 470 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 ATP2C1P98194 919 aaPredicted RBP22.66■■□□□ 1.22
DDX39A-207ENST00000588542 CYP4A11Q02928 519 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 FAM26DQ5JW98 314 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 DEFB128Q7Z7B8 93 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 C4orf19Q8IY42 314 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 SEPT9Q9UHD8 586 aaPredicted RBP22.66■■□□□ 1.22
DDX39A-207ENST00000588542 CEP131Q9UPN4 1083 aa22.66■■□□□ 1.22
DDX39A-207ENST00000588542 DDX11L8A8MPP1 907 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 RSPH10B2B2RC85 870 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms