RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	SPAG1	Q07617	926 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MYBPC3	Q14896	1274 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	KLHL7	Q8IXQ5	586 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	IFT20	Q8IY31	132 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	RAPGEF5	Q92565	580 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	APPBP2	Q92624	585 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZNF570	Q96NI8	536 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PURB	Q96QR8	312 aa	Known RBP	10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	OSBPL1A	Q9BXW6	950 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PIH1D3	Q9NQM4	214 aa	Known RBP	10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZSWIM5	Q9P217	1185 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	FAM205A	Q6ZU69	1335 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TRAPPC3	O43617	180 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	EIF4B	P23588	611 aa	Known RBP	10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	XRCC4	Q13426	336 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PRPF4B	Q13523	1007 aa	Known RBP	10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SPA17	Q15506	151 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NUGGC	Q68CJ6	796 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CPLX4	Q7Z7G2	160 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZFAND2B	Q8WV99	257 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NOP53	Q9NZM5	478 aa	Known RBP	10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	HYOU1	Q9Y4L1	999 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NUB1	Q9Y5A7	615 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TACC3	Q9Y6A5	838 aa		10.34	□□□□□ -0.75
CACNA2D4-223	ENST00000588077		H7C1D1	291 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	USP17L8	P0C7I0	530 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	FAM133B	Q5BKY9	247 aa	Known RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	TMEM110	Q86TL2	294 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	RNF168	Q8IYW5	571 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	ZNF507	Q8TCN5	953 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PRCC	Q92733	491 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	DTNBP1	Q96EV8	351 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	TRIM47	Q96LD4	638 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	TLR10	Q9BXR5	811 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	SH2D4A	Q9H788	454 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PIDD1	Q9HB75	910 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	UTRN	P46939	3433 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	ARFGEF1	Q9Y6D6	1849 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	ZFY	P08048	801 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	VIL1	P09327	827 aa	Known RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	DES	P17661	470 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CYP11B2	P19099	503 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	KIF5B	P33176	963 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CA8	P35219	290 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PAK2	Q13177	524 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	MEA1	Q16626	185 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GALNT17	Q6IS24	598 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GPC2	Q8N158	579 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CERS5	Q8N5B7	392 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	MTMR8	Q96EF0	704 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	UBE2O	Q9C0C9	1292 aa	Known RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	FOXP1	Q9H334	677 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PANK4	Q9NVE7	773 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	C2CD2	Q9Y426	696 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PCDHA13	Q9Y5I0	950 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	MYO3B	Q8WXR4	1341 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077		A6NHS1	94 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	EPHB6	O15197	1021 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	FTCD	O95954	541 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CYP7A1	P22680	504 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	DEUP1	Q05D60	604 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	DIXDC1	Q155Q3	683 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	RTN1	Q16799	776 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	TRIM22	Q8IYM9	498 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	MAGEB6	Q8N7X4	407 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	AGAP11	Q8TF27	550 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CCT6B	Q92526	530 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	TMBIM4	Q9HC24	238 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	SLC12A6	Q9UHW9	1150 aa		10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CNOT7	Q9UIV1	285 aa	Known RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	NOVA2	Q9UNW9	492 aa	Known RBP	10.33	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	AKAP11	Q9UKA4	1901 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	LIN7A	O14910	233 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	LUC7L3	O95232	432 aa	Known RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GRIK5	Q16478	980 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CDC37	Q16543	378 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	MICALL2	Q8IY33	904 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	SPICE1	Q8N0Z3	855 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GDF3	Q9NR23	364 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	ARHGAP20	Q9P2F6	1191 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	CEP131	Q9UPN4	1083 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	STK36	Q9NRP7	1315 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077		A8MUI8	341 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	RPN1	P04843	607 aa	Known RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	LDHC	P07864	332 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	MYZAP	P0CAP1	466 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	IFNAR1	P17181	557 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	HSD17B3	P37058	310 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	EIF4A3	P38919	411 aa	Known RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PTGDR	Q13258	359 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GLE1	Q53GS7	698 aa	Known RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	PPP4R3A	Q6IN85	833 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	SLF2	Q8IX21	1173 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	AGBL3	Q8NEM8	1001 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	GALNT8	Q9NY28	637 aa		10.32	□□□□□ -0.76
CACNA2D4-223	ENST00000588077	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.32	□□□□□ -0.76	2e-6	■■■■□ 21.8

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms