RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 IER5Q5VY09 327 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 SWSAP1Q6NVH7 229 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 PIK3AP1Q6ZUJ8 805 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 NME8Q8N427 588 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 SEPT8Q92599 483 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 APBB2Q92870 758 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 PBX4Q9BYU1 374 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 PCDHA11Q9Y5I1 949 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 SQORQ9Y6N5 450 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 IGSF9BQ9UPX0 1349 aa11.75□□□□□ -0.53
SMARCA4-209ENST00000586122 SMIM35A0A1B0GVV1 85 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 M0QZ92 97 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 MBTPS1Q14703 1052 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 PLEKHG4Q58EX7 1191 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 MARCH8Q5T0T0 291 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 KRT40Q6A162 431 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 SLFN12Q8IYM2 578 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 ETNPPLQ8TBG4 499 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 C8orf76Q96K31 380 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 SEMA6BQ9H3T3 888 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
SMARCA4-209ENST00000586122 MAGEB2O15479 319 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 CCNT1O60563 726 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 CTSHP09668 335 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 SIP14410 1827 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 WDR5P61964 334 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 IGBP1P78318 339 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 MRPS6P82932 125 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 PPP2R5CQ13362 524 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 ORC2Q13416 577 aaPredicted RBP11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 B3GNT9Q6UX72 402 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 Q7L0L9 218 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 HERC6Q8IVU3 1022 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 LOXHD1Q8IVV2 1947 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 ZNF576Q9H609 170 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 SLC28A3Q9HAS3 691 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 KCNMB3Q9NPA1 279 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 GABBR1Q9UBS5 961 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 KDM3AQ9Y4C1 1321 aa11.73□□□□□ -0.53
SMARCA4-209ENST00000586122 PTPRSQ13332 1948 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 SZT2Q5T011 3432 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 GRXCR1A8MXD5 290 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 SLC37A4O43826 429 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 MARCH6O60337 910 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 AMHP03971 560 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 OATP04181 439 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 KLRC1P26715 233 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 MGAT3Q09327 533 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 NR5A1Q13285 461 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 ODR4Q5SWX8 454 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 DBF4BQ8NFT6 615 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 PPME1Q9Y570 386 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 TRPV2Q9Y5S1 764 aa11.72□□□□□ -0.53
SMARCA4-209ENST00000586122 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 CHMP2AO43633 222 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 CHRNA1P02708 482 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 ATP4AP20648 1035 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 TMOD1P28289 359 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 PBX2P40425 430 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 PSMC5P62195 406 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 PRKCEQ02156 737 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 XKR3Q5GH77 459 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 TSHZ1Q6ZSZ6 1077 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 GUCD1Q96NT3 240 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 UIMC1Q96RL1 719 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 FAM49AQ9H0Q0 323 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 CDY2AQ9Y6F7 541 aa11.71□□□□□ -0.53
SMARCA4-209ENST00000586122 TTC3P53804 2025 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 ZBTB42B2RXF5 422 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 TLL1O43897 1013 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 NEMFO60524 1076 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 GJB5O95377 273 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 C22orf31O95567 290 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms