RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 CAMK1Q14012 370 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 PPP1R18Q6NYC8 613 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 CENPQQ7L2Z9 268 aaPredicted RBP15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 NME8Q8N427 588 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 ANO3Q9BYT9 981 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 ALG13Q9NP73 1137 aaKnown RBP15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 PRKAG3Q9UGI9 489 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 PADI3Q9ULW8 664 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 TRPV2Q9Y5S1 764 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 IGSF9BQ9UPX0 1349 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 NLRC5Q86WI3 1866 aa15.31■□□□□ 0.04
AC055811.3-201ENST00000584952 IGKV6D-21A0A0A0MT36 114 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 SMCO2A6NFE2 343 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 STXBP3O00186 592 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 MMP1P03956 469 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 SLC26A2P50443 739 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 ZP2Q05996 745 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 DLX2Q07687 328 aaPredicted RBP15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 PAK2Q13177 524 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 RTN1Q16799 776 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 MTHFD1LQ6UB35 978 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 NPAS4Q8IUM7 802 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 CMTR2Q8IYT2 770 aaKnown RBP15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 P2RX5Q93086 422 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 TCEANC2Q96MN5 208 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 TMEM260Q9NX78 707 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 BARHL2Q9NY43 387 aa15.3■□□□□ 0.04
AC055811.3-201ENST00000584952 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 SMIM35A0A1B0GVV1 85 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 CCNE2O96020 404 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 STAG3L1P0CL83 205 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 SCG2P13521 617 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 KLRC1P26715 233 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 SREBF1P36956 1147 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 KRT76Q01546 638 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 AP3B2Q13367 1082 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 TSGA10IPQ3SY00 556 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 NAALADL2Q58DX5 795 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 BMP2KLQ5H9B9 411 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 ADHFE1Q8IWW8 467 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 GLT8D2Q9H1C3 349 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 TMX1Q9H3N1 280 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 IGFLR1Q9H665 355 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 TTC3P53804 2025 aa15.29■□□□□ 0.04
AC055811.3-201ENST00000584952 BACH1O14867 736 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 DCXO43602 365 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 CSPG5O95196 566 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 ZNF76P36508 570 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 ADAM15Q13444 863 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 SMAD2Q15796 467 aaKnown RBP15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 CLUL1Q15846 466 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 ABHD15Q6UXT9 468 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 FAM43BQ6ZT52 329 aaPredicted RBP15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 NIPA1Q7RTP0 329 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 SPPL3Q8TCT6 385 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 ATP8B4Q8TF62 1192 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
AC055811.3-201ENST00000584952 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 GOLGA8AA7E2F4 631 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 FAM86B1E9PN63 330 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 DDX39AO00148 427 aaKnown RBP15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 HBP1O60381 514 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 ITGB1P05556 798 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 FAM86B2P0C5J1 330 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 DNAJB1P25685 340 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 TMEM266Q2M3C6 531 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 PAN2Q504Q3 1202 aaKnown RBP15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 FAM160B1Q5W0V3 765 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 KIAA0319LQ8IZA0 1049 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 KLHL23Q8NBE8 558 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 LRFN2Q9ULH4 789 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 GINS2Q9Y248 185 aa15.27■□□□□ 0.04
AC055811.3-201ENST00000584952 LINC01565O15544 149 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 MBTPS2O43462 519 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 TBX10O75333 385 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 CDC27P30260 824 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 KRT32Q14532 448 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 CSPP1Q1MSJ5 1256 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 SWSAP1Q6NVH7 229 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 SKAP1Q86WV1 359 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 PLA2G4DQ86XP0 818 aa15.26■□□□□ 0.03
AC055811.3-201ENST00000584952 CCDC60Q8IWA6 550 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms