RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ZNF827Q17R98 1081 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 CFAP100Q494V2 611 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 TBC1D10BQ4KMP7 808 aaPredicted RBP5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 PAN2Q504Q3 1202 aaKnown RBP5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 CDCA2Q69YH5 1023 aaPredicted RBP5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 VASNQ6EMK4 673 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 TRMT10BQ6PF06 316 aaKnown RBP5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 DBX2Q6ZNG2 339 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 EP400NLQ6ZTU2 488 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 OTOP1Q7RTM1 612 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 THNSL2Q86YJ6 484 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 C2orf69Q8N8R5 385 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 ZCRB1Q8TBF4 217 aaKnown RBP5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 CD244Q9BZW8 370 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 MTFR1LQ9H019 292 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 TMEM168Q9H0V1 697 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 ATP23Q9Y6H3 246 aa5.63□□□□□ -1.51
PPP4R1-227ENST00000583988 M0R2C6 588 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 PDE8AO60658 829 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 GLRX3O76003 335 aaKnown RBP5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 PLATP00750 562 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 ITGB3P05106 788 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 ZBTB48P10074 688 aaPredicted RBP5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 PTPN1P18031 435 aaKnown RBP5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 GJA4P35212 333 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 SOX5P35711 763 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 FIGNQ5HY92 759 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 PIK3R6Q5UE93 754 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 BTBD8Q5XKL5 378 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 ZNF662Q6ZS27 426 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 GGNQ86UU5 652 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 CISD2Q8N5K1 135 aaKnown RBP5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 CHAC2Q8WUX2 184 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 LOXL4Q96JB6 756 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 TARS2Q9BW92 718 aaKnown RBP5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 CABP5Q9NP86 173 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 FTSJ1Q9UET6 329 aa5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 CNOT11Q9UKZ1 510 aaKnown RBP5.62□□□□□ -1.51
PPP4R1-227ENST00000583988 SLC12A8A0AV02 714 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 ANKRD62A6NC57 917 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 CBX4O00257 560 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 B4GALT3O60512 393 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 CPEP16870 476 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 NEK4P51957 841 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 DHCR24Q15392 516 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 CNNM4Q6P4Q7 775 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 FILIP1Q7Z7B0 1213 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 RNF180Q86T96 592 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 PROSER1Q86XN7 944 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 NOSTRINQ8IVI9 506 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 ZCCHC14Q8WYQ9 949 aaKnown RBP5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 DLG3Q92796 817 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 SCYL1Q96KG9 808 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 YTHDC1Q96MU7 727 aaKnown RBP5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 WRNIP1Q96S55 665 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 IFT57Q9NWB7 429 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 SMPD4Q9NXE4 827 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 B4GALT6Q9UBX8 382 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 ZDHHC9Q9Y397 364 aa5.61□□□□□ -1.51
PPP4R1-227ENST00000583988 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 KCNK3O14649 394 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 C4BPAP04003 597 aaKnown RBP5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 ENO2P09104 434 aaPredicted RBP5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 INSRRP14616 1297 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 MAGEA10P43363 369 aaPredicted RBP5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 GLRBP48167 497 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 SEC23AQ15436 765 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 DDX46Q7L014 1031 aaKnown RBP5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 LIMS2Q7Z4I7 341 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 CHST14Q8NCH0 376 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 RBM15Q96T37 977 aaKnown RBP eCLIP5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 GPR20Q99678 358 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 DLL4Q9NR61 685 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 RIC8BQ9NVN3 520 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 JAG2Q9Y219 1238 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 B3GALT1Q9Y5Z6 326 aa5.6□□□□□ -1.51
PPP4R1-227ENST00000583988 PTPDC1A2A3K4 754 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 LAMTOR5O43504 91 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 FBXO21O94952 628 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 F2P00734 622 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 IBSPP21815 317 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 SCNN1BP51168 640 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 HERVK_113P62684 666 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 DBPQ10586 325 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 PCBP1Q15365 356 aaKnown RBP eCLIP5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 SKIDA1Q1XH10 827 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 ZXDCQ2QGD7 858 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 CD276Q5ZPR3 534 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 PKN3Q6P5Z2 889 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 GLB1LQ6UWU2 654 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 KBTBD2Q8IY47 623 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 BORCS6Q96GS4 357 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 BOCQ9BWV1 1114 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 BARX1Q9HBU1 254 aaPredicted RBP5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 JADE2Q9NQC1 790 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 KCNH7Q9NS40 1196 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 ZKSCAN5Q9Y2L8 839 aa5.59□□□□□ -1.51
PPP4R1-227ENST00000583988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.58□□□□□ -1.52
PPP4R1-227ENST00000583988 SCDO00767 359 aa5.58□□□□□ -1.52
PPP4R1-227ENST00000583988 ZEB2O60315 1214 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms