RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CATSPEREQ5SY80 951 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 UBXN11Q5T124 520 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 PIK3R6Q5UE93 754 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 UBE2R2Q712K3 238 aaPredicted RBP5.32□□□□□ -1.56
VAPA-206ENST00000583475 KLHL36Q8N4N3 616 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 CHST14Q8NCH0 376 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 ASB15Q8WXK1 588 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 NINJ1Q92982 152 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 GBP4Q96PP9 640 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 MTFR1LQ9H019 292 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 INCENPQ9NQS7 918 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 FTSJ1Q9UET6 329 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 INVSQ9Y283 1065 aa5.32□□□□□ -1.56
VAPA-206ENST00000583475 PTPDC1A2A3K4 754 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 GOLGA6L22H0YM25 854 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 CBX4O00257 560 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 FOXP2O15409 715 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 CDC45O75419 566 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 FLT3P36888 993 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 TMEM132BQ14DG7 1078 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 DALRD3Q5D0E6 543 aaKnown RBP5.31□□□□□ -1.56
VAPA-206ENST00000583475 CC2D1AQ6P1N0 951 aaPredicted RBP5.31□□□□□ -1.56
VAPA-206ENST00000583475 Q6ZUG5 572 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 KIAA0907Q7Z7F0 614 aaPredicted RBP5.31□□□□□ -1.56
VAPA-206ENST00000583475 FAM124AQ86V42 546 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 LGI4Q8N135 537 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 AJUBAQ96IF1 538 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 ORAI3Q9BRQ5 295 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 UCKL1Q9NWZ5 548 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 B4GALT6Q9UBX8 382 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 ADAM29Q9UKF5 820 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 ZDHHC9Q9Y397 364 aa5.31□□□□□ -1.56
VAPA-206ENST00000583475 TLDC2A0PJX2 215 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 PRAMEF22A3QJZ6 481 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 H0Y858 1186 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 KRT37O76014 449 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 POU3F2P20265 443 aaPredicted RBP5.3□□□□□ -1.56
VAPA-206ENST00000583475 STILQ15468 1287 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 GIMAP6Q6P9H5 292 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 BORAQ6PGQ7 559 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 LRSAM1Q6UWE0 723 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 DPP8Q6V1X1 898 aaPredicted RBP5.3□□□□□ -1.56
VAPA-206ENST00000583475 LRRTM3Q86VH5 581 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 DHX37Q8IY37 1157 aaKnown RBP5.3□□□□□ -1.56
VAPA-206ENST00000583475 FEZ1Q99689 392 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 BTBD2Q9BX70 525 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 KATNBL1Q9H079 304 aa5.3□□□□□ -1.56
VAPA-206ENST00000583475 BARX1Q9HBU1 254 aaPredicted RBP5.3□□□□□ -1.56
VAPA-206ENST00000583475 ENPP3O14638 875 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 HIP1RO75146 1068 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 ECE1P42892 770 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 IL13RA1P78552 427 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
VAPA-206ENST00000583475 KIF18BQ86Y91 864 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 KBTBD2Q8IY47 623 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 NIM1KQ8IY84 436 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 FOXRED1Q96CU9 486 aaPredicted RBP5.29□□□□□ -1.56
VAPA-206ENST00000583475 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.56
VAPA-206ENST00000583475 CABP5Q9NP86 173 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 ASB1Q9Y576 335 aa5.29□□□□□ -1.56
VAPA-206ENST00000583475 B4GALT4O60513 344 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 SYN1P17600 705 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 POLD1P28340 1107 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 CSF2RBP32927 897 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 KIF11P52732 1056 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 PCBP1Q15365 356 aaKnown RBP eCLIP5.28□□□□□ -1.56
VAPA-206ENST00000583475 SKOR2Q2VWA4 1001 aaPredicted RBP5.28□□□□□ -1.56
VAPA-206ENST00000583475 PLEKHG4Q58EX7 1191 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 KANK2Q63ZY3 851 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 CREB3L3Q68CJ9 461 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 CNNM4Q6P4Q7 775 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 CXXC5Q7LFL8 322 aaKnown RBP5.28□□□□□ -1.56
VAPA-206ENST00000583475 RTN4RL1Q86UN2 441 aaPredicted RBP5.28□□□□□ -1.56
VAPA-206ENST00000583475 HIPK4Q8NE63 616 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 ACSS2Q9NR19 701 aa5.28□□□□□ -1.56
VAPA-206ENST00000583475 B8ZZF3 427 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 KPNA6O60684 536 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 F2P00734 622 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 PLATP00750 562 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 ITGB3P05106 788 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 ATP2A2P16615 1042 aaKnown RBP5.27□□□□□ -1.57
VAPA-206ENST00000583475 NEK4P51957 841 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 PPP2CBP62714 309 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 PPP2CAP67775 309 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 CD83Q01151 205 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 PLP2Q04941 152 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 TOP3AQ13472 1001 aaPredicted RBP5.27□□□□□ -1.57
VAPA-206ENST00000583475 WDR72Q3MJ13 1102 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 NXPE1Q8N323 547 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 ERCC4Q92889 916 aaPredicted RBP5.27□□□□□ -1.57
VAPA-206ENST00000583475 C16orf92Q96LL3 132 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 BDH2Q9BUT1 245 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 SSBP3Q9BWW4 388 aaPredicted RBP5.27□□□□□ -1.57
VAPA-206ENST00000583475 ZDHHC5Q9C0B5 715 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 OR10A5Q9H207 317 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 PLAAQ9Y263 795 aa5.27□□□□□ -1.57
VAPA-206ENST00000583475 A0A087X0B3 334 aa5.26□□□□□ -1.57
VAPA-206ENST00000583475 H7C1D1 291 aa5.26□□□□□ -1.57
VAPA-206ENST00000583475 PRRG2O14669 202 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms