RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
TOP3A-214ENST00000582981 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
TOP3A-214ENST00000582981 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 SMIM23A6NLE4 172 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-214ENST00000582981 MGRN1O60291 552 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 CEP104O60308 925 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 NOL4O94818 638 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 MYZAPP0CAP1 466 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 AKR1B1P15121 316 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 CACNB3P54284 484 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 ICA1Q05084 483 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 TRAF1Q13077 416 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 UNC13DQ70J99 1090 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 IQCKQ8N0W5 287 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 ITFG2Q969R8 447 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 PAGR1Q9BTK6 254 aa11.47□□□□□ -0.57
TOP3A-214ENST00000582981 CHORDC1Q9UHD1 332 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-214ENST00000582981 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 UFL1O94874 794 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 GNA11P29992 359 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 KLHL30Q0D2K2 578 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 FAM26FQ5R3K3 315 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 SFMBT2Q5VUG0 894 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 UHMK1Q8TAS1 419 aaKnown RBP11.46□□□□□ -0.57
TOP3A-214ENST00000582981 MAGEC3Q8TD91 643 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 DPH5Q9H2P9 285 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 SH3GLB2Q9NR46 395 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 GGT7Q9UJ14 662 aa11.46□□□□□ -0.57
TOP3A-214ENST00000582981 ANKRD33BA6NCL7 494 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 CLIC2O15247 247 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.58
TOP3A-214ENST00000582981 TCP1P17987 556 aaKnown RBP11.46□□□□□ -0.58
TOP3A-214ENST00000582981 FLT3P36888 993 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 SCNN1DP51172 638 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 PAK2Q13177 524 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 XRCC4Q13426 336 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 MYOCDQ8IZQ8 938 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 RETREG2Q8NC44 543 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 RAD54LQ92698 747 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 BORCS6Q96GS4 357 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 CELF4Q9BZC1 486 aaKnown RBP11.46□□□□□ -0.58
TOP3A-214ENST00000582981 TSGA10Q9BZW7 698 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 PANK4Q9NVE7 773 aa11.46□□□□□ -0.58
TOP3A-214ENST00000582981 HMGB1P1B2RPK0 211 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 PPP1R11O60927 126 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 SMIM24O75264 130 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 BAG3O95817 575 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 PYGLP06737 847 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 ITGA4P13612 1032 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 ADCY7P51828 1080 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 KCNA1Q09470 495 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 PRPF4BQ13523 1007 aaKnown RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 TMEM266Q2M3C6 531 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 MFSD14BQ5SR56 506 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 SLC30A9Q6PML9 568 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 GPBP1Q86WP2 473 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 KSR1Q8IVT5 923 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 ZNF570Q96NI8 536 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 ARAP2Q8WZ64 1704 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 RAB27AP51159 221 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 PABPC4Q13310 644 aaKnown RBP eCLIP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 SLC9C1Q4G0N8 1177 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 CFAP221Q4G0U5 840 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 ZC3H12AQ5D1E8 599 aaKnown RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 RPUSD2Q8IZ73 545 aaKnown RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 KCNV2Q8TDN2 545 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 CAVIN3Q969G5 261 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 NEUROG2Q9H2A3 272 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 AJAP1Q9UKB5 411 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 STK38LQ9Y2H1 464 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 DOT1LQ8TEK3 1739 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 STRCQ7RTU9 1775 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 HGSO14964 777 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 PSMC6P62333 389 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 TSG101Q99816 390 aa11.45□□□□□ -0.58
TOP3A-214ENST00000582981 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 NOP53Q9NZM5 478 aaKnown RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 DDX25Q9UHL0 483 aaKnown RBP11.45□□□□□ -0.58
TOP3A-214ENST00000582981 GRID2IPA4D2P6 1211 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 RSPH10B2B2RC85 870 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 C6orf229H3BNL8 230 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 RSPH10BP0C881 870 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 ABCB4P21439 1286 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 PRPHP41219 470 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 RANBP1P43487 201 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 GLE1Q53GS7 698 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms