RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SKIV2LQ15477 1246 aaKnown RBP23.77■■□□□ 1.4
CCDC42-203ENST00000581598 FAM160B1Q5W0V3 765 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 POTEBQ6S5H4 581 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 YME1L1Q96TA2 773 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 SH3GLB2Q9NR46 395 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 TBC1D22BQ9NU19 505 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 MTUS1Q9ULD2 1270 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 MYH9P35579 1960 aaKnown RBP23.77■■□□□ 1.4
CCDC42-203ENST00000581598 LOXHD1Q8IVV2 1947 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 SMIM35A0A1B0GVV1 85 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 TNFRSF10AO00220 468 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 HBP1O60381 514 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 FAM43BQ6ZT52 329 aaPredicted RBP23.76■■□□□ 1.39
CCDC42-203ENST00000581598 NME8Q8N427 588 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 IL27Q8NEV9 243 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 FBXO22Q8NEZ5 403 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 ADAMTS19Q8TE59 1207 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 C17orf80Q9BSJ5 609 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 SLC26A6Q9BXS9 759 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 CYP46A1Q9Y6A2 500 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 KDM3AQ9Y4C1 1321 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 COL1A2P08123 1366 aa23.76■■□□□ 1.39
CCDC42-203ENST00000581598 EIF5BO60841 1220 aaKnown RBP23.75■■□□□ 1.39
CCDC42-203ENST00000581598 UPP2O95045 317 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 BMP1P13497 986 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 ZNF746Q6NUN9 644 aaPredicted RBP23.75■■□□□ 1.39
CCDC42-203ENST00000581598 MIS18BP1Q6P0N0 1132 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 MTHFD1LQ6UB35 978 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 ATP8B4Q8TF62 1192 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 ZNF274Q96GC6 653 aaPredicted RBP23.75■■□□□ 1.39
CCDC42-203ENST00000581598 ZNF577Q9BSK1 485 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 TRPV2Q9Y5S1 764 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 REV3LO60673 3130 aa23.75■■□□□ 1.39
CCDC42-203ENST00000581598 WDR81Q562E7 1941 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 M0QZ92 97 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 DDX39AO00148 427 aaKnown RBP23.74■■□□□ 1.39
CCDC42-203ENST00000581598 ENPP3O14638 875 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 CCT2P78371 535 aaKnown RBP23.74■■□□□ 1.39
CCDC42-203ENST00000581598 TFF2Q03403 129 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 EPC2Q52LR7 807 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 CCDC60Q8IWA6 550 aaPredicted RBP23.74■■□□□ 1.39
CCDC42-203ENST00000581598 SMAP1Q8IYB5 467 aaPredicted RBP23.74■■□□□ 1.39
CCDC42-203ENST00000581598 TRAPPC12Q8WVT3 735 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 HLA-CQ95604 372 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 ZBTB10Q96DT7 871 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 FAM49AQ9H0Q0 323 aaPredicted RBP23.74■■□□□ 1.39
CCDC42-203ENST00000581598 ZNF302Q9NR11 478 aa23.74■■□□□ 1.39
CCDC42-203ENST00000581598 BRWD1Q9NSI6 2320 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 BACH1O14867 736 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 SEC24BO95487 1268 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 KRT76Q01546 638 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 ZNF484Q5JVG2 852 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 TRIM22Q8IYM9 498 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 FAM177A1Q8N128 213 aaPredicted RBP23.73■■□□□ 1.39
CCDC42-203ENST00000581598 IL17RAQ96F46 866 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 UHRF1Q96T88 793 aaPredicted RBP23.73■■□□□ 1.39
CCDC42-203ENST00000581598 FTHL17Q9BXU8 183 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 CELF4Q9BZC1 486 aaKnown RBP23.73■■□□□ 1.39
CCDC42-203ENST00000581598 AGO3Q9H9G7 860 aaKnown RBP23.73■■□□□ 1.39
CCDC42-203ENST00000581598 RC3H2Q9HBD1 1191 aaKnown RBP23.73■■□□□ 1.39
CCDC42-203ENST00000581598 NCOA5Q9HCD5 579 aaKnown RBP23.73■■□□□ 1.39
CCDC42-203ENST00000581598 VPS54Q9P1Q0 977 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 IGSF9BQ9UPX0 1349 aa23.73■■□□□ 1.39
CCDC42-203ENST00000581598 TCF20Q9UGU0 1960 aaKnown RBP23.72■■□□□ 1.39
CCDC42-203ENST00000581598 EVPLQ92817 2033 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 H3BNC9 293 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 USP11P51784 963 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 PDXDC2PQ6P474 469 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 RASGRP4Q8TDF6 673 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 LENG9Q96B70 501 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 MAFBQ9Y5Q3 323 aaPredicted RBP23.72■■□□□ 1.39
CCDC42-203ENST00000581598 XIRP2A4UGR9 3374 aa23.72■■□□□ 1.39
CCDC42-203ENST00000581598 KLRC1P26715 233 aa23.71■■□□□ 1.39
CCDC42-203ENST00000581598 PRR16Q569H4 304 aa23.71■■□□□ 1.39
CCDC42-203ENST00000581598 SWSAP1Q6NVH7 229 aa23.71■■□□□ 1.39
CCDC42-203ENST00000581598 TMEM192Q8IY95 271 aa23.71■■□□□ 1.39
CCDC42-203ENST00000581598 BBXQ8WY36 941 aaPredicted RBP23.71■■□□□ 1.39
CCDC42-203ENST00000581598 ZNF689Q96CS4 500 aaPredicted RBP23.71■■□□□ 1.39
CCDC42-203ENST00000581598 MRPL38Q96DV4 380 aaKnown RBP23.71■■□□□ 1.39
CCDC42-203ENST00000581598 C22orf23Q9BZE7 217 aa23.71■■□□□ 1.39
CCDC42-203ENST00000581598 EDIL3O43854 480 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 ATP4AP20648 1035 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 CD52P31358 61 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 SSRP1Q08945 709 aaKnown RBP23.7■■□□□ 1.38
CCDC42-203ENST00000581598 PTPROQ16827 1216 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 FIBCD1Q8N539 461 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 TCEAL9Q9UHQ7 104 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 RWDD3Q9Y3V2 267 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 PCDHA10Q9Y5I2 948 aa23.7■■□□□ 1.38
CCDC42-203ENST00000581598 ADGRA3Q8IWK6 1321 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 ZBTB42B2RXF5 422 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 C5orf67F2Z3F1 127 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 PPFIA3O75145 1194 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 DEXIO95424 95 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 PSAPP07602 524 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 LINC00271P0C7V0 271 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 KCNQ1P51787 676 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 NLRP5P59047 1200 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 CRIPAKQ8N1N5 446 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 LINC01599Q8WXQ3 324 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms