RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 FBXO47Q5MNV8 452 aa14.19□□□□□ -0.14
SENP3-204ENST00000580997 PLA2G4DQ86XP0 818 aa14.19□□□□□ -0.14
SENP3-204ENST00000580997 MICALL1Q8N3F8 863 aa14.19□□□□□ -0.14
SENP3-204ENST00000580997 TM6SF1Q9BZW5 370 aa14.19□□□□□ -0.14
SENP3-204ENST00000580997 COG5Q9UP83 839 aa14.19□□□□□ -0.14
SENP3-204ENST00000580997 COL4A6Q14031 1691 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 SMIM35A0A1B0GVV1 85 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 ENPP3O14638 875 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 IGBP1P78318 339 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 MRPS6P82932 125 aaKnown RBP14.18□□□□□ -0.14
SENP3-204ENST00000580997 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
SENP3-204ENST00000580997 TFF2Q03403 129 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 AAK1Q2M2I8 961 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 IER5Q5VY09 327 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 TSHZ1Q6ZSZ6 1077 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 CRIPAKQ8N1N5 446 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 NME8Q8N427 588 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 GDPD5Q8WTR4 605 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 ZBTB10Q96DT7 871 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 ZNF274Q96GC6 653 aaPredicted RBP14.18□□□□□ -0.14
SENP3-204ENST00000580997 SAMD11Q96NU1 681 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 YME1L1Q96TA2 773 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 C17orf80Q9BSJ5 609 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 SH3GLB2Q9NR46 395 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 MTUS1Q9ULD2 1270 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 CDY2AQ9Y6F7 541 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 MICAL3Q7RTP6 2002 aa14.18□□□□□ -0.14
SENP3-204ENST00000580997 BDP1A6H8Y1 2624 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 TNFRSF10AO00220 468 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 EDIL3O43854 480 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 HBP1O60381 514 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 UPP2O95045 317 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 CCT2P78371 535 aaKnown RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 SETQ01105 290 aaPredicted RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 EPC2Q52LR7 807 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 ZNF746Q6NUN9 644 aaPredicted RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 MTHFD1LQ6UB35 978 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 FAM43BQ6ZT52 329 aaPredicted RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 CCDC60Q8IWA6 550 aaPredicted RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 ADAMTS19Q8TE59 1207 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 ATP8B4Q8TF62 1192 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 LENG9Q96B70 501 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 ZNF577Q9BSK1 485 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 SLC26A6Q9BXS9 759 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 FAM49AQ9H0Q0 323 aaPredicted RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 RC3H2Q9HBD1 1191 aaKnown RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 NCOA5Q9HCD5 579 aaKnown RBP14.17□□□□□ -0.14
SENP3-204ENST00000580997 CYP46A1Q9Y6A2 500 aa14.17□□□□□ -0.14
SENP3-204ENST00000580997 KDM3AQ9Y4C1 1321 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 ZBTB42B2RXF5 422 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 ATP4AP20648 1035 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 KLRC1P26715 233 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 USP11P51784 963 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
SENP3-204ENST00000580997 FAM160B1Q5W0V3 765 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 SMAP1Q8IYB5 467 aaPredicted RBP14.16□□□□□ -0.14
SENP3-204ENST00000580997 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 TRAPPC12Q8WVT3 735 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 HLA-CQ95604 372 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 CELF4Q9BZC1 486 aaKnown RBP14.16□□□□□ -0.14
SENP3-204ENST00000580997 ZNF302Q9NR11 478 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 VPS54Q9P1Q0 977 aa14.16□□□□□ -0.14
SENP3-204ENST00000580997 MAFBQ9Y5Q3 323 aaPredicted RBP14.16□□□□□ -0.14
SENP3-204ENST00000580997 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 KAT6AQ92794 2004 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 COL1A2P08123 1366 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 H3BNC9 293 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 DDX39AO00148 427 aaKnown RBP14.15□□□□□ -0.14
SENP3-204ENST00000580997 BACH1O14867 736 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 PPFIA3O75145 1194 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 CD52P31358 61 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 PRR16Q569H4 304 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 ZNF484Q5JVG2 852 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 MIS18BP1Q6P0N0 1132 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 RTN4RL1Q86UN2 441 aaPredicted RBP14.15□□□□□ -0.14
SENP3-204ENST00000580997 TMEM192Q8IY95 271 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 KIAA0319LQ8IZA0 1049 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
SENP3-204ENST00000580997 RASGRP4Q8TDF6 673 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 ZNF689Q96CS4 500 aaPredicted RBP14.15□□□□□ -0.14
SENP3-204ENST00000580997 UHRF1Q96T88 793 aaPredicted RBP14.15□□□□□ -0.14
SENP3-204ENST00000580997 FTHL17Q9BXU8 183 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 PCDHA10Q9Y5I2 948 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 TRPV2Q9Y5S1 764 aa14.15□□□□□ -0.14
SENP3-204ENST00000580997 SIP14410 1827 aa14.14□□□□□ -0.15
SENP3-204ENST00000580997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
SENP3-204ENST00000580997 C5orf67F2Z3F1 127 aa14.14□□□□□ -0.15
SENP3-204ENST00000580997 M0QZ92 97 aa14.14□□□□□ -0.15
SENP3-204ENST00000580997 KCNQ1P51787 676 aa14.14□□□□□ -0.15
SENP3-204ENST00000580997 KRT76Q01546 638 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms