RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 CLDND1Q9NY35 253 aa23.74■■□□□ 1.39
SNX11-207ENST00000580875 BRPF3Q9ULD4 1205 aa23.74■■□□□ 1.39
SNX11-207ENST00000580875 ARIH1Q9Y4X5 557 aaPredicted RBP23.74■■□□□ 1.39
SNX11-207ENST00000580875 TRPV2Q9Y5S1 764 aa23.74■■□□□ 1.39
SNX11-207ENST00000580875 POTEB3A0JP26 581 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 FAM86C2PA6NEL3 165 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 SMCO2A6NFE2 343 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 STXBP3O00186 592 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 SLC26A2P50443 739 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 TMEM62Q0P6H9 643 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 AP3B2Q13367 1082 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 POTEBQ6S5H4 581 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 TRAPPC12Q8WVT3 735 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 BARHL2Q9NY43 387 aa23.73■■□□□ 1.39
SNX11-207ENST00000580875 MEIS1O00470 390 aa23.72■■□□□ 1.39
SNX11-207ENST00000580875 ATG7O95352 703 aa23.72■■□□□ 1.39
SNX11-207ENST00000580875 SREBF1P36956 1147 aa23.72■■□□□ 1.39
SNX11-207ENST00000580875 NME8Q8N427 588 aa23.72■■□□□ 1.39
SNX11-207ENST00000580875 CELF4Q9BZC1 486 aaKnown RBP23.72■■□□□ 1.39
SNX11-207ENST00000580875 PADI3Q9ULW8 664 aa23.72■■□□□ 1.39
SNX11-207ENST00000580875 IGSF9BQ9UPX0 1349 aa23.72■■□□□ 1.39
SNX11-207ENST00000580875 SMIM35A0A1B0GVV1 85 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 GOLGA8AA7E2F4 631 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 GOLGA8BA8MQT2 603 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 PAK2Q13177 524 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 TSGA10IPQ3SY00 556 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 MTHFD1LQ6UB35 978 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 NIPA1Q7RTP0 329 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 RTN4RL1Q86UN2 441 aaPredicted RBP23.71■■□□□ 1.39
SNX11-207ENST00000580875 NPAS4Q8IUM7 802 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 CMTR2Q8IYT2 770 aaKnown RBP23.71■■□□□ 1.39
SNX11-207ENST00000580875 RASEFQ8IZ41 740 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 CRIPAKQ8N1N5 446 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 TMEM260Q9NX78 707 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 TTC3P53804 2025 aa23.71■■□□□ 1.39
SNX11-207ENST00000580875 KDM3AQ9Y4C1 1321 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 IGKV6D-21A0A0A0MT36 114 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 KLF18A0A0U1RQI7 1052 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 MMP1P03956 469 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 ALADP13716 330 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 ZNF76P36508 570 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 CLK2P49760 499 aaKnown RBP23.7■■□□□ 1.38
SNX11-207ENST00000580875 RCAN1P53805 252 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 KRT32Q14532 448 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 CTC1Q2NKJ3 1217 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 ADCK5Q3MIX3 580 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 PRKAG3Q9UGI9 489 aa23.7■■□□□ 1.38
SNX11-207ENST00000580875 MRPL42Q9Y6G3 142 aaKnown RBP23.7■■□□□ 1.38
SNX11-207ENST00000580875 BACH1O14867 736 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 CCNE2O96020 404 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 STAG3L1P0CL83 205 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 SCG2P13521 617 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 LTBRP36941 435 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 KRT76Q01546 638 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 HYAL1Q12794 435 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 FAM160B1Q5W0V3 765 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 P2RX5Q93086 422 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 FAM217BQ9NTX9 383 aaPredicted RBP23.69■■□□□ 1.38
SNX11-207ENST00000580875 PLAGL2Q9UPG8 496 aa23.69■■□□□ 1.38
SNX11-207ENST00000580875 DDX39AO00148 427 aaKnown RBP23.68■■□□□ 1.38
SNX11-207ENST00000580875 HBP1O60381 514 aa23.68■■□□□ 1.38
SNX11-207ENST00000580875 HMGB1P09429 215 aaKnown RBP23.68■■□□□ 1.38
SNX11-207ENST00000580875 CDC27P30260 824 aa23.68■■□□□ 1.38
SNX11-207ENST00000580875 ZP2Q05996 745 aa23.68■■□□□ 1.38
SNX11-207ENST00000580875 NAALADL2Q58DX5 795 aa23.68■■□□□ 1.38
SNX11-207ENST00000580875 ABHD15Q6UXT9 468 aa23.68■■□□□ 1.38
SNX11-207ENST00000580875 ATP8B4Q8TF62 1192 aa23.68■■□□□ 1.38
SNX11-207ENST00000580875 ALG13Q9NP73 1137 aaKnown RBP23.68■■□□□ 1.38
SNX11-207ENST00000580875 PRR33A8MZF0 331 aa23.67■■□□□ 1.38
SNX11-207ENST00000580875 FAM86B1E9PN63 330 aa23.67■■□□□ 1.38
SNX11-207ENST00000580875 FAM86B2P0C5J1 330 aa23.67■■□□□ 1.38
SNX11-207ENST00000580875 KLRC1P26715 233 aa23.67■■□□□ 1.38
SNX11-207ENST00000580875 PFKFB3Q16875 520 aaPredicted RBP23.67■■□□□ 1.38
SNX11-207ENST00000580875 FAM43BQ6ZT52 329 aaPredicted RBP23.67■■□□□ 1.38
SNX11-207ENST00000580875 TMX1Q9H3N1 280 aa23.67■■□□□ 1.38
SNX11-207ENST00000580875 NAP1L2Q9ULW6 460 aaPredicted RBP23.67■■□□□ 1.38
SNX11-207ENST00000580875 COL1A2P08123 1366 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 CSPG5O95196 566 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 FGD1P98174 961 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 DLX2Q07687 328 aaPredicted RBP23.66■■□□□ 1.38
SNX11-207ENST00000580875 CAMK1Q14012 370 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 TMEM266Q2M3C6 531 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 JAKMIP3Q5VZ66 844 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 MIS18BP1Q6P0N0 1132 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 PLA2G4DQ86XP0 818 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 ADHFE1Q8IWW8 467 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 ZNF302Q9NR11 478 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 LRFN2Q9ULH4 789 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 GINS2Q9Y248 185 aa23.66■■□□□ 1.38
SNX11-207ENST00000580875 CCDC196A0A1B0GTZ2 297 aa23.65■■□□□ 1.38
SNX11-207ENST00000580875 C19orf67A6NJJ6 358 aa23.65■■□□□ 1.38
SNX11-207ENST00000580875 IPO5O00410 1097 aaKnown RBP23.65■■□□□ 1.38
SNX11-207ENST00000580875 CYP3A4P08684 503 aa23.65■■□□□ 1.38
SNX11-207ENST00000580875 METAP2P50579 478 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNX11-207ENST00000580875 NFX1Q12986 1120 aaKnown RBP23.65■■□□□ 1.38
SNX11-207ENST00000580875 SMAD2Q15796 467 aaKnown RBP23.65■■□□□ 1.38
SNX11-207ENST00000580875 PAN2Q504Q3 1202 aaKnown RBP23.65■■□□□ 1.38
SNX11-207ENST00000580875 ZNF484Q5JVG2 852 aa23.65■■□□□ 1.38
SNX11-207ENST00000580875 PDXDC2PQ6P474 469 aa23.65■■□□□ 1.38
SNX11-207ENST00000580875 CCDC60Q8IWA6 550 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms