RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 DDX39AO00148 427 aaKnown RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 GLI1P08151 1106 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 BMP3P12645 472 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 ASIC2Q16515 512 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 MIGA2Q7L4E1 593 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 ZNF571Q7Z3V5 609 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 SLFN12Q8IYM2 578 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 TSEN2Q8NCE0 465 aaKnown RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 FAM71BQ8TC56 605 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 DCAF4Q8WV16 495 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 EIF2AK1Q9BQI3 630 aaKnown RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 EHD4Q9H223 541 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 PRR12Q9ULL5 1215 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 TMCO5BA8MYB1 307 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 PDE6BP35913 854 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 NOP2P46087 812 aaKnown RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 KNOP1Q1ED39 458 aaKnown RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 MAP9Q49MG5 647 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 TMEM179Q6ZVK1 233 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
TOP3A-209ENST00000580095 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 MKL1Q969V6 931 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 CEP63Q96MT8 703 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 GANQ9H2C0 597 aa11.51□□□□□ -0.57
TOP3A-209ENST00000580095 CYP3A7-CYP3A51PA0A087WV96 503 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 TARSL2A2RTX5 802 aaKnown RBP11.5□□□□□ -0.57
TOP3A-209ENST00000580095 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 UCHL3P15374 230 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 CYP3A7P24462 503 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 RPA1P27694 616 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 PAFAH1B1P43034 410 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 SLC18A3Q16572 532 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 RBM26Q5T8P6 1007 aaKnown RBP11.5□□□□□ -0.57
TOP3A-209ENST00000580095 C8orf74Q6P047 294 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 WDR18Q9BV38 432 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 FAM153AQ9UHL3 310 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 ABCB11O95342 1321 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 RGPD3A6NKT7 1758 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-209ENST00000580095 RGPD4Q7Z3J3 1758 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 SSU72P8A0A1W2PR75 194 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 GOLGA6BA6NDN3 693 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
TOP3A-209ENST00000580095 PON1P27169 355 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 ACTN2P35609 894 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 CARSP49589 748 aaKnown RBP11.5□□□□□ -0.57
TOP3A-209ENST00000580095 EXOC3L4Q17RC7 722 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 STRIP1Q5VSL9 837 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 TATDN1Q6P1N9 297 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 SYT2Q8N9I0 419 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-209ENST00000580095 DYDC2Q96IM9 177 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 KRT12Q99456 494 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 VAV3Q9UKW4 847 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 MYO3BQ8WXR4 1341 aa11.5□□□□□ -0.57
TOP3A-209ENST00000580095 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 RAD17O75943 681 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 NR3C1P04150 777 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 SREBF1P36956 1147 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 GUCY2DQ02846 1103 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 NAB2Q15742 525 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 IQCEQ6IPM2 695 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 CCDC70Q6NSX1 233 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 MYCT1Q8N699 235 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 ERMNQ8TAM6 284 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 AENQ8WTP8 325 aaKnown RBP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 GLIS2Q9BZE0 524 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 WRAP73Q9P2S5 460 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 NFU1Q9UMS0 254 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 ASTN1O14525 1302 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 GRID2IPA4D2P6 1211 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 IRF6O14896 467 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 TRIM66O15016 1216 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 PJA2O43164 708 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 TUBBP07437 444 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 CYP2J2P51589 502 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 KCTD16Q68DU8 428 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 LEKR1Q6ZMV7 388 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 IRF2BP2Q7Z5L9 587 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 MMGT1Q8N4V1 131 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 IQCDQ96DY2 449 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 IDI2Q9BXS1 227 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 ACBD3Q9H3P7 528 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.49□□□□□ -0.57
TOP3A-209ENST00000580095 EPB41L5Q9HCM4 733 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 STIM2Q9P246 746 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 FAM184BQ9ULE4 1060 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 MYH4Q9Y623 1939 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 FRMD3A2A2Y4 597 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 YDJCA8MPS7 323 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 KCNK3O14649 394 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 C21orf2O43822 256 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 AFPP02771 609 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms