RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 EXOSC10Q01780 885 aaKnown RBP15.24■□□□□ 0.03
TRAF4-214ENST00000580073 ZP2Q05996 745 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 FAM160B1Q5W0V3 765 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 PLPPR4Q7Z2D5 763 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 NME8Q8N427 588 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 ZNF689Q96CS4 500 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-214ENST00000580073 TCEANC2Q96MN5 208 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 MXRA8Q9BRK3 442 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 LRRC2Q9BYS8 371 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 FAM49AQ9H0Q0 323 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-214ENST00000580073 KCNH6Q9H252 994 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 PCDHA2Q9Y5H9 948 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 CNTNAP5Q8WYK1 1306 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 KDM3AQ9Y4C1 1321 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 ENPP3O14638 875 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 EPB41L2O43491 1005 aaKnown RBP15.23■□□□□ 0.03
TRAF4-214ENST00000580073 SCG2P13521 617 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 INSRRP14616 1297 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 RXRAP19793 462 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 STAT5BP51692 787 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 SMAD4Q13485 552 aaKnown RBP15.23■□□□□ 0.03
TRAF4-214ENST00000580073 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 RIC8AQ9NPQ8 531 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 C11orf16Q9NQ32 467 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 KCNH7Q9NS40 1196 aa15.23■□□□□ 0.03
TRAF4-214ENST00000580073 SMIM35A0A1B0GVV1 85 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 POTEB3A0JP26 581 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 ACTR2P61160 394 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 RTN1Q16799 776 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 CEP55Q53EZ4 464 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 MARCH8Q5T0T0 291 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 POTEBQ6S5H4 581 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 NIPA1Q7RTP0 329 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 CMTR1Q8N1G2 835 aaKnown RBP15.22■□□□□ 0.03
TRAF4-214ENST00000580073 KHSRPQ92945 711 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRAF4-214ENST00000580073 NEK1Q96PY6 1258 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 CD320Q9NPF0 282 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 AAASQ9NRG9 546 aa15.22■□□□□ 0.03
TRAF4-214ENST00000580073 GRM6O15303 877 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 ZBTB43O43298 467 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 SRGAP2BP0DMP2 458 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 CD52P31358 61 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 ZNF76P36508 570 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 NDUFV1P49821 464 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 RCAN1P53805 252 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 SETQ01105 290 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-214ENST00000580073 KRT76Q01546 638 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 KRT32Q14532 448 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 SMAD2Q15796 467 aaKnown RBP15.21■□□□□ 0.03
TRAF4-214ENST00000580073 CTC1Q2NKJ3 1217 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 APOA5Q6Q788 366 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 CCDC82Q8N4S0 544 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 CCDC12Q8WUD4 166 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-214ENST00000580073 JAKMIP1Q96N16 626 aaKnown RBP15.21■□□□□ 0.03
TRAF4-214ENST00000580073 UIMC1Q96RL1 719 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 ANO3Q9BYT9 981 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 CELF4Q9BZC1 486 aaKnown RBP15.21■□□□□ 0.03
TRAF4-214ENST00000580073 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 C1orf112Q9NSG2 853 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 CD207Q9UJ71 328 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 TELO2Q9Y4R8 837 aa15.21■□□□□ 0.03
TRAF4-214ENST00000580073 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 BACH1O14867 736 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 HBP1O60381 514 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 HMGB1P09429 215 aaKnown RBP15.2■□□□□ 0.02
TRAF4-214ENST00000580073 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 SREBF1P36956 1147 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 UBE3AQ05086 875 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 PLCB4Q15147 1175 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 PADI3Q9ULW8 664 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 PCDHB12Q9Y5F1 795 aa15.2■□□□□ 0.02
TRAF4-214ENST00000580073 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
TRAF4-214ENST00000580073 CCDC196A0A1B0GTZ2 297 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 hCG_1642624A0A1W2PR95 340 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 DENND3A2RUS2 1198 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 MBTPS2O43462 519 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 SARSP49591 514 aaKnown RBP15.19■□□□□ 0.02
TRAF4-214ENST00000580073 HYAL1Q12794 435 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 SPOUT1Q5T280 376 aaKnown RBP15.19■□□□□ 0.02
TRAF4-214ENST00000580073 MIS18BP1Q6P0N0 1132 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 DHX32Q7L7V1 743 aaKnown RBP15.19■□□□□ 0.02
TRAF4-214ENST00000580073 AGO3Q9H9G7 860 aaKnown RBP15.19■□□□□ 0.02
TRAF4-214ENST00000580073 AGO4Q9HCK5 861 aaKnown RBP15.19■□□□□ 0.02
TRAF4-214ENST00000580073 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 PLAGL2Q9UPG8 496 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 CEP131Q9UPN4 1083 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 PCDHB7Q9Y5E2 793 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 MUC6Q6W4X9 2439 aa15.19■□□□□ 0.02
TRAF4-214ENST00000580073 SMCO2A6NFE2 343 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 GOLGA8BA8MQT2 603 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 GPR182O15218 404 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 TBX10O75333 385 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 RPS6KA5O75582 802 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 FGD1P98174 961 aa15.18■□□□□ 0.02
TRAF4-214ENST00000580073 TMEM62Q0P6H9 643 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms