RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 ZC2HC1CQ53FD0 456 aaPredicted RBP16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 ZFPM1Q8IX07 1006 aa16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 MSL3Q8N5Y2 521 aaKnown RBP16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 MYCT1Q8N699 235 aa16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 ANO3Q9BYT9 981 aa16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 RIOX1Q9H6W3 641 aa16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 FBXL5Q9UKA1 691 aa16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 COL22A1Q8NFW1 1626 aaPredicted RBP16.09■□□□□ 0.17
CUEDC1-206ENST00000577830 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.17
CUEDC1-206ENST00000577830 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.17
CUEDC1-206ENST00000577830 REEP2Q9BRK0 252 aa16.08■□□□□ 0.17
CUEDC1-206ENST00000577830 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.17
CUEDC1-206ENST00000577830 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.17
CUEDC1-206ENST00000577830 GRIN2DO15399 1336 aa16.08■□□□□ 0.17
CUEDC1-206ENST00000577830 SPDYE3A6NKU9 549 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 TRIM49P0CI25 452 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 TRIM49CP0CI26 452 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 GBP6Q6ZN66 633 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 VPS36Q86VN1 386 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 CCDC25Q86WR0 208 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 USP38Q8NB14 1042 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 ZC3H12CQ9C0D7 883 aaKnown RBP16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 TSKSQ9UJT2 592 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 ZBTB21Q9ULJ3 1066 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 NOC2LQ9Y3T9 749 aaKnown RBP16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 KIF4AO95239 1232 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 NMT1P30419 496 aaKnown RBP16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 DHX9Q08211 1270 aaKnown RBP16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 PDIA5Q14554 519 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 METTL13Q8N6R0 699 aa16.08■□□□□ 0.16
CUEDC1-206ENST00000577830 ZBTB5O15062 677 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 FGGP02679 453 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 H2AFZP0C0S5 128 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 SLCO1A2P46721 670 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 SETQ01105 290 aaPredicted RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 PSMD2Q13200 908 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 ASTE1Q2TB18 679 aaPredicted RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 MEI1Q5TIA1 1274 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 H2AFVQ71UI9 128 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 SLF2Q8IX21 1173 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 MDM1Q8TC05 714 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CCT8L2Q96SF2 557 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 BCORQ6W2J9 1755 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 AKAP3O75969 853 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 HLA-DOAP06340 250 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 HSD17B3P37058 310 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 ZNF662Q6ZS27 426 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CFBP00751 764 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 EPB41P11171 864 aaKnown RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 SLC20A2Q08357 652 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CPLX4Q7Z7G2 160 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CEP57Q86XR8 500 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 ZNF473Q8WTR7 871 aaKnown RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 ATP6V1G3Q96LB4 118 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 CCDC114Q96M63 670 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 NEUROG2Q9H2A3 272 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 DBNDD1Q9H9R9 158 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 TMOD4Q9NZQ9 345 aa16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 AJAP1Q9UKB5 411 aaPredicted RBP16.07■□□□□ 0.16
CUEDC1-206ENST00000577830 FLOT1O75955 427 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 FAM13AO94988 1023 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 GYS1P13807 737 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 PRLRP16471 622 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 ZNF746Q6NUN9 644 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 IQCDQ96DY2 449 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 TAF1DQ9H5J8 278 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 NRAPQ86VF7 1730 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 PPP1R37O75864 691 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 TMEM119Q4V9L6 283 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 B4GALNT4Q76KP1 1039 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 SYCP3Q8IZU3 236 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 PROM2Q8N271 834 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 EFCC1Q9HA90 598 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 MAGOHP61326 146 aaKnown RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 COG2Q14746 738 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 NBPF9Q3BBW0 867 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 AADACL2Q6P093 401 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 NLRP14Q86W24 1093 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 GLG1Q92896 1179 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 ZNF622Q969S3 477 aaKnown RBP eCLIP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 MAGOHBQ96A72 148 aaKnown RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 PCIF1Q9H4Z3 704 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 NAGPAQ9UK23 515 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 TRPC5Q9UL62 973 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 CASZ1Q86V15 1759 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 DOCK2Q92608 1830 aa16.06■□□□□ 0.16
CUEDC1-206ENST00000577830 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
CUEDC1-206ENST00000577830 HNRNPH1P31943 449 aaKnown RBP16.05■□□□□ 0.16
CUEDC1-206ENST00000577830 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms