RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 ZNF215Q9UL58 517 aaPredicted RBP8.04□□□□□ -1.12
CASC3-205ENST00000577605 NOD1Q9Y239 953 aa8.04□□□□□ -1.12
CASC3-205ENST00000577605 UBIAD1Q9Y5Z9 338 aa8.04□□□□□ -1.12
CASC3-205ENST00000577605 GRIN2DO15399 1336 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 PLXNA1Q9UIW2 1896 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 HAS3O00219 553 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 WNT7AO00755 349 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 F2P00734 622 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 RPLP2P05387 115 aaKnown RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 CYP3A4P08684 503 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 CPA1P15085 419 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 UBA1P22314 1058 aaKnown RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 SREBF1P36956 1147 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 FXR1P51114 621 aaKnown RBP eCLIP8.03□□□□□ -1.12
CASC3-205ENST00000577605 SKOR1P84550 965 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 PSRC1Q6PGN9 363 aaPredicted RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 RAB11FIP4Q86YS3 637 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 CAGE1Q8TC20 777 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 SEPT1Q8WYJ6 367 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 COPS5Q92905 334 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
CASC3-205ENST00000577605 MXRA8Q9BRK3 442 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 SLC26A6Q9BXS9 759 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 SLKQ9H2G2 1235 aaPredicted RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 HIPK3Q9H422 1215 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 UPF2Q9HAU5 1272 aaKnown RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 TOR4AQ9NXH8 423 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 RTEL1Q9NZ71 1219 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 DDX49Q9Y6V7 483 aaKnown RBP8.03□□□□□ -1.12
CASC3-205ENST00000577605 NFASCO94856 1347 aa8.03□□□□□ -1.12
CASC3-205ENST00000577605 hCG_1642624A0A1W2PR95 340 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 H3BRB1 525 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 MEIS1O00470 390 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 B4GALT4O60513 344 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 PFKFB2O60825 505 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 CAND2O75155 1236 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 DGAT1O75907 488 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 ITGB5P18084 799 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 ZNF76P36508 570 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 SLC26A2P50443 739 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 USP11P51784 963 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 NLRP5P59047 1200 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 PSMC6P62333 389 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 SETQ01105 290 aaPredicted RBP8.02□□□□□ -1.13
CASC3-205ENST00000577605 SP2Q02086 613 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 RBL2Q08999 1139 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 PTK7Q13308 1070 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 PKN1Q16512 942 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 PTGISQ16647 500 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 UBE2SQ16763 222 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 HSDL1Q3SXM5 330 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 CEP55Q53EZ4 464 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 TMEM63BQ5T3F8 832 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 FAM109BQ6ICB4 259 aaPredicted RBP8.02□□□□□ -1.13
CASC3-205ENST00000577605 PHLDB3Q6NSJ2 640 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 CYP4X1Q8N118 509 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 IL31RAQ8NI17 732 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 AFAP1L1Q8TED9 768 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 GPR20Q99678 358 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
CASC3-205ENST00000577605 SDF4Q9BRK5 362 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 ANO3Q9BYT9 981 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 UPF3BQ9BZI7 483 aaKnown RBP8.02□□□□□ -1.13
CASC3-205ENST00000577605 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.13
CASC3-205ENST00000577605 IL23AQ9NPF7 189 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 TBC1D22BQ9NU19 505 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 GTF2IRD1Q9UHL9 959 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 TCEAL9Q9UHQ7 104 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 STK36Q9NRP7 1315 aa8.02□□□□□ -1.13
CASC3-205ENST00000577605 ZNFX1Q9P2E3 1918 aaKnown RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 LRRC37A2A6NM11 1700 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 FGBP02675 491 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 ACTN1P12814 892 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 CIITAP33076 1130 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 WNT7BP56706 349 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 SMAD3P84022 425 aaKnown RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 KIAA0753Q2KHM9 967 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 CYFIP1Q7L576 1253 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 DAGLBQ8NCG7 672 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 SREK1Q8WXA9 508 aaKnown RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 TSC1Q92574 1164 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 KAT2BQ92831 832 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 PHKBQ93100 1093 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 MRGPRX2Q96LB1 330 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 ZSCAN31Q96LW9 406 aaPredicted RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 C16orf70Q9BSU1 422 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 NOC4LQ9BVI4 516 aaKnown RBP8.01□□□□□ -1.13
CASC3-205ENST00000577605 TRPV6Q9H1D0 765 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 SMARCAD1Q9H4L7 1026 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 KCNH7Q9NS40 1196 aa8.01□□□□□ -1.13
CASC3-205ENST00000577605 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms